Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 KRT8P49-201ENST00000604166 1432 ntBASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 KRT223P-202ENST00000449164 1292 ntBASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 RNA5SP410-201ENST00000516285 106 ntBASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 AC055876.2-201ENST00000531834 546 ntBASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 MIR4538-201ENST00000581377 78 ntBASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM43Q96BQ3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM43Q96BQ3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 FAM8A2P-201ENST00000528813 1142 ntBASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 AP005482.1-201ENST00000563722 1273 ntBASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 SRD5A3P1-201ENST00000603021 949 ntBASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM43Q96BQ3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 AC133552.6-201ENST00000613406 534 ntBASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 AL133338.1-201ENST00000565695 1517 ntBASIC18.13■□□□□ 0.49
TRIM43Q96BQ3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.12■□□□□ 0.49
TRIM43Q96BQ3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms