Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 MRPL20P1-201ENST00000400819 433 ntBASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 AC007967.2-201ENST00000432613 625 ntBASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 DNAJB3-201ENST00000446806 729 ntBASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 AC108073.2-201ENST00000464002 357 ntBASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 AC064836.3-201ENST00000607928 673 ntBASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.8■□□□□ 0.28
SH3KBP1Q96B97 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 PTCHD3P3-201ENST00000403073 906 ntBASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 VN2R19P-201ENST00000442399 1052 ntBASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 AC002347.1-201ENST00000569543 541 ntBASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SH3KBP1Q96B97 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 AC022211.2-201ENST00000585075 2527 ntBASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 MIR1233-2-201ENST00000408138 82 ntBASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 MIR1233-1-201ENST00000408722 82 ntBASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SH3KBP1Q96B97 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms