Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HPS1Q92902 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HPS1Q92902 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HPS1Q92902 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
HPS1Q92902 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.57■□□□□ 0.08
HPS1Q92902 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.57■□□□□ 0.08
HPS1Q92902 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
HPS1Q92902 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HPS1Q92902 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HPS1Q92902 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HPS1Q92902 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.57■□□□□ 0.08
HPS1Q92902 AC060834.1-201ENST00000443027 2032 ntBASIC15.57■□□□□ 0.08
HPS1Q92902 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HPS1Q92902 MIR149-201ENST00000384879 89 ntBASIC15.57■□□□□ 0.08
HPS1Q92902 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.57■□□□□ 0.08
HPS1Q92902 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.57■□□□□ 0.08
HPS1Q92902 AC090142.2-201ENST00000483263 416 ntBASIC15.57■□□□□ 0.08
HPS1Q92902 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.57■□□□□ 0.08
HPS1Q92902 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.57■□□□□ 0.08
HPS1Q92902 AC008687.5-201ENST00000593746 558 ntBASIC15.57■□□□□ 0.08
HPS1Q92902 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
HPS1Q92902 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HPS1Q92902 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.57■□□□□ 0.08
HPS1Q92902 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.57■□□□□ 0.08
HPS1Q92902 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HPS1Q92902 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HPS1Q92902 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.57■□□□□ 0.08
HPS1Q92902 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.56■□□□□ 0.08
HPS1Q92902 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS1Q92902 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
HPS1Q92902 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS1Q92902 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
HPS1Q92902 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
HPS1Q92902 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS1Q92902 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 BX276092.5-203ENST00000456199 560 ntBASIC15.56■□□□□ 0.08
HPS1Q92902 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS1Q92902 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
HPS1Q92902 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS1Q92902 AC011498.5-201ENST00000592027 486 ntBASIC15.56■□□□□ 0.08
HPS1Q92902 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS1Q92902 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS1Q92902 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.56■□□□□ 0.08
HPS1Q92902 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS1Q92902 AL163051.1-201ENST00000569214 1512 ntBASIC15.56■□□□□ 0.08
HPS1Q92902 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.56■□□□□ 0.08
HPS1Q92902 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HPS1Q92902 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HPS1Q92902 AC126177.1-201ENST00000547829 2218 ntBASIC15.56■□□□□ 0.08
HPS1Q92902 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HPS1Q92902 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
HPS1Q92902 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.56■□□□□ 0.08
HPS1Q92902 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.55■□□□□ 0.08
HPS1Q92902 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.55■□□□□ 0.08
HPS1Q92902 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HPS1Q92902 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms