Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.19■□□□□ 0.02
RNF138Q8WVD3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 FAM86C2P-203ENST00000528684 1004 ntBASIC15.18■□□□□ 0.02
RNF138Q8WVD3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 AC092865.5-201ENST00000545435 363 ntBASIC15.18■□□□□ 0.02
RNF138Q8WVD3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 AC016027.1-202ENST00000607927 1699 ntBASIC15.18■□□□□ 0.02
RNF138Q8WVD3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
RNF138Q8WVD3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 AP006288.1-201ENST00000446065 395 ntBASIC15.17■□□□□ 0.02
RNF138Q8WVD3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 MIR3687-2-201ENST00000577708 61 ntBASIC15.17■□□□□ 0.02
RNF138Q8WVD3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 MIR4469-201ENST00000583919 79 ntBASIC15.17■□□□□ 0.02
RNF138Q8WVD3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 AC020765.3-201ENST00000613051 740 ntBASIC15.17■□□□□ 0.02
RNF138Q8WVD3 MIR3687-1-201ENST00000614492 61 ntBASIC15.17■□□□□ 0.02
RNF138Q8WVD3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF138Q8WVD3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
RNF138Q8WVD3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF138Q8WVD3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF138Q8WVD3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF138Q8WVD3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF138Q8WVD3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF138Q8WVD3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF138Q8WVD3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF138Q8WVD3 NKILA-202ENST00000614771 2598 ntBASIC15.16■□□□□ 0.02
RNF138Q8WVD3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF138Q8WVD3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF138Q8WVD3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF138Q8WVD3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms