Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 IL9RP2-201ENST00000423948 1312 ntBASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDH19Q8TAB3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 AL356488.2-201ENST00000602755 427 ntBASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 MIR7706-201ENST00000613747 67 ntBASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDH19Q8TAB3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
PCDH19Q8TAB3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
PCDH19Q8TAB3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.46■□□□□ 0.38
PCDH19Q8TAB3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.46■□□□□ 0.38
PCDH19Q8TAB3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 AC093909.1-201ENST00000504731 1122 ntBASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 SLC25A1P1-201ENST00000528351 927 ntBASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 AC107918.2-201ENST00000530817 355 ntBASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 AL049840.3-201ENST00000602669 611 ntBASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 AC008667.4-201ENST00000607370 168 ntBASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDH19Q8TAB3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 IGHV3-65-201ENST00000523210 341 ntBASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 MIR4492-201ENST00000581627 80 ntBASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 MPDU1-223ENST00000582151 728 ntBASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDH19Q8TAB3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms