Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEDD1Q8NHV4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 KRT8P39-201ENST00000396270 1433 ntBASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 AL139011.1-202ENST00000642063 584 ntBASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEDD1Q8NHV4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 TSEN15P1-201ENST00000423257 515 ntBASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 AC023141.5-201ENST00000458585 616 ntBASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 AC069335.1-201ENST00000489972 472 ntBASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 HLA-J-203ENST00000494367 1087 ntBASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEDD1Q8NHV4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 AC084121.4-201ENST00000641598 221 ntBASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 AF228730.8-201ENST00000642140 221 ntBASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.59■□□□□ 0.73
NEDD1Q8NHV4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
NEDD1Q8NHV4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NEDD1Q8NHV4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NEDD1Q8NHV4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.58■□□□□ 0.73
NEDD1Q8NHV4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NEDD1Q8NHV4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
NEDD1Q8NHV4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.58■□□□□ 0.72
NEDD1Q8NHV4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.58■□□□□ 0.72
NEDD1Q8NHV4 FAM58DP-201ENST00000428076 619 ntBASIC19.58■□□□□ 0.72
NEDD1Q8NHV4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.58■□□□□ 0.72
NEDD1Q8NHV4 AC005237.2-201ENST00000434368 219 ntBASIC19.58■□□□□ 0.72
NEDD1Q8NHV4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NEDD1Q8NHV4 KRT8P23-201ENST00000560090 1207 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms