Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.15■□□□□ 0.5
BEST2Q8NFU1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
BEST2Q8NFU1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
BEST2Q8NFU1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.14■□□□□ 0.49
BEST2Q8NFU1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 RPS8P6-201ENST00000426177 609 ntBASIC18.14■□□□□ 0.49
BEST2Q8NFU1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 MIR4492-201ENST00000581627 80 ntBASIC18.14■□□□□ 0.49
BEST2Q8NFU1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 AC092902.6-201ENST00000641783 218 ntBASIC18.14■□□□□ 0.49
BEST2Q8NFU1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.14■□□□□ 0.49
BEST2Q8NFU1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 CYP2A7P1-201ENST00000595391 815 ntBASIC18.13■□□□□ 0.49
BEST2Q8NFU1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BEST2Q8NFU1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BEST2Q8NFU1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms