Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 CROCCP2-202ENST00000412962 2773 ntBASIC17.44■□□□□ 0.38
PAF1Q8N7H5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 AL049840.3-201ENST00000602669 611 ntBASIC17.44■□□□□ 0.38
PAF1Q8N7H5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PAF1Q8N7H5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 AL139424.1-201ENST00000607572 797 ntBASIC17.43■□□□□ 0.38
PAF1Q8N7H5 MIR7706-201ENST00000613747 67 ntBASIC17.43■□□□□ 0.38
PAF1Q8N7H5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 AC016396.2-201ENST00000562575 1417 ntBASIC17.43■□□□□ 0.38
PAF1Q8N7H5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PAF1Q8N7H5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.42■□□□□ 0.38
PAF1Q8N7H5 ACTG1P4-201ENST00000425123 1122 ntBASIC17.42■□□□□ 0.38
PAF1Q8N7H5 AC136632.2-201ENST00000512891 861 ntBASIC17.42■□□□□ 0.38
PAF1Q8N7H5 AL356488.2-201ENST00000602755 427 ntBASIC17.42■□□□□ 0.38
PAF1Q8N7H5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 AP002414.3-201ENST00000589352 1468 ntBASIC17.42■□□□□ 0.38
PAF1Q8N7H5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PAF1Q8N7H5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PAF1Q8N7H5 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms