Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 TSPY26P-202ENST00000565928 3884 ntBASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.83■□□□□ 0.12
DEPDC4Q8N2C3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 MYCLP1-201ENST00000372451 1075 ntBASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 VENTXP7-201ENST00000475503 772 ntBASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 KRT126P-201ENST00000549467 1181 ntBASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 AL691432.3-201ENST00000621860 400 ntBASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.82■□□□□ 0.12
DEPDC4Q8N2C3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 TSPY12P-201ENST00000421279 868 ntBASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 TPM4P1-201ENST00000436100 807 ntBASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 AP002414.4-201ENST00000589764 1148 ntBASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 AC092171.3-201ENST00000610122 2651 ntBASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DEPDC4Q8N2C3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms