Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.5■□□□□ 0.39
SCML4Q8N228 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.5■□□□□ 0.39
SCML4Q8N228 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.5■□□□□ 0.39
SCML4Q8N228 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SCML4Q8N228 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.5■□□□□ 0.39
SCML4Q8N228 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.5■□□□□ 0.39
SCML4Q8N228 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.5■□□□□ 0.39
SCML4Q8N228 AC010327.4-202ENST00000591484 748 ntBASIC17.5■□□□□ 0.39
SCML4Q8N228 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SCML4Q8N228 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.5■□□□□ 0.39
SCML4Q8N228 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.5■□□□□ 0.39
SCML4Q8N228 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.5■□□□□ 0.39
SCML4Q8N228 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SCML4Q8N228 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SCML4Q8N228 AC078925.2-201ENST00000624013 1973 ntBASIC17.49■□□□□ 0.39
SCML4Q8N228 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.49■□□□□ 0.39
SCML4Q8N228 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SCML4Q8N228 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.49■□□□□ 0.39
SCML4Q8N228 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.49■□□□□ 0.39
SCML4Q8N228 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.49■□□□□ 0.39
SCML4Q8N228 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SCML4Q8N228 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.49■□□□□ 0.39
SCML4Q8N228 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
SCML4Q8N228 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.49■□□□□ 0.39
SCML4Q8N228 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.49■□□□□ 0.39
SCML4Q8N228 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.49■□□□□ 0.39
SCML4Q8N228 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.49■□□□□ 0.39
SCML4Q8N228 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SCML4Q8N228 AL671710.1-201ENST00000610245 2349 ntBASIC17.49■□□□□ 0.39
SCML4Q8N228 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
SCML4Q8N228 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SCML4Q8N228 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCML4Q8N228 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SCML4Q8N228 AKAP8P1-201ENST00000434743 1349 ntBASIC17.48■□□□□ 0.39
SCML4Q8N228 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML4Q8N228 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SCML4Q8N228 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCML4Q8N228 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML4Q8N228 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML4Q8N228 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML4Q8N228 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SCML4Q8N228 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCML4Q8N228 AL512652.2-201ENST00000625156 1716 ntBASIC17.48■□□□□ 0.39
SCML4Q8N228 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML4Q8N228 AL355306.1-201ENST00000415580 579 ntBASIC17.48■□□□□ 0.39
SCML4Q8N228 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.48■□□□□ 0.39
SCML4Q8N228 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.48■□□□□ 0.39
SCML4Q8N228 FAM86C2P-203ENST00000528684 1004 ntBASIC17.48■□□□□ 0.39
SCML4Q8N228 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.48■□□□□ 0.39
SCML4Q8N228 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.48■□□□□ 0.39
SCML4Q8N228 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.48■□□□□ 0.39
SCML4Q8N228 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
SCML4Q8N228 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.48■□□□□ 0.39
SCML4Q8N228 AL078644.1-201ENST00000609881 752 ntBASIC17.48■□□□□ 0.39
SCML4Q8N228 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SCML4Q8N228 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.48■□□□□ 0.39
SCML4Q8N228 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCML4Q8N228 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCML4Q8N228 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCML4Q8N228 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SCML4Q8N228 AC099398.1-201ENST00000567919 2776 ntBASIC17.48■□□□□ 0.39
SCML4Q8N228 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCML4Q8N228 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.48■□□□□ 0.39
SCML4Q8N228 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCML4Q8N228 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms