Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 RPS15P9-201ENST00000494093 319 ntBASIC16.35■□□□□ 0.21
KRT78Q8N1N4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 AP002469.2-201ENST00000531724 424 ntBASIC16.35■□□□□ 0.21
KRT78Q8N1N4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 AC005593.1-201ENST00000624894 515 ntBASIC16.35■□□□□ 0.21
KRT78Q8N1N4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 KRT8P49-201ENST00000604166 1432 ntBASIC16.35■□□□□ 0.21
KRT78Q8N1N4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
KRT78Q8N1N4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 AC106886.4-201ENST00000623557 2502 ntBASIC16.34■□□□□ 0.21
KRT78Q8N1N4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 AC073621.1-201ENST00000392730 636 ntBASIC16.34■□□□□ 0.21
KRT78Q8N1N4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 DUX4L17-201ENST00000557360 1267 ntBASIC16.34■□□□□ 0.21
KRT78Q8N1N4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 AL356488.2-201ENST00000602755 427 ntBASIC16.34■□□□□ 0.21
KRT78Q8N1N4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 AC009053.2-201ENST00000563701 2365 ntBASIC16.34■□□□□ 0.21
KRT78Q8N1N4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
KRT78Q8N1N4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT78Q8N1N4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT78Q8N1N4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT78Q8N1N4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT78Q8N1N4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT78Q8N1N4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT78Q8N1N4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
KRT78Q8N1N4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 HNRNPDP1-201ENST00000439535 754 ntBASIC16.33■□□□□ 0.2
KRT78Q8N1N4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 AC104692.2-201ENST00000603054 253 ntBASIC16.33■□□□□ 0.2
KRT78Q8N1N4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 NKILA-202ENST00000614771 2598 ntBASIC16.33■□□□□ 0.2
KRT78Q8N1N4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
KRT78Q8N1N4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms