Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 AC064836.3-201ENST00000607928 673 ntBASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 ACTL9-202ENST00000612068 1252 ntBASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCUBE3Q8IX30 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 PRORSD1P-202ENST00000563365 2154 ntBASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 AC140113.2-201ENST00000604370 208 ntBASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SCUBE3Q8IX30 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.77■□□□□ 0.43
SCUBE3Q8IX30 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCUBE3Q8IX30 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCUBE3Q8IX30 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SCUBE3Q8IX30 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SCUBE3Q8IX30 SLC22A20-204ENST00000530038 1673 ntBASIC17.77■□□□□ 0.43
SCUBE3Q8IX30 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SCUBE3Q8IX30 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.77■□□□□ 0.43
SCUBE3Q8IX30 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SCUBE3Q8IX30 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 AGGF1P2-201ENST00000426656 2106 ntBASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 MPDU1-223ENST00000582151 728 ntBASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 AC027601.4-201ENST00000611259 610 ntBASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 AC078925.2-201ENST00000624013 1973 ntBASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 FLJ38576-201ENST00000623820 2459 ntBASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SCUBE3Q8IX30 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 AL391256.1-201ENST00000443260 1855 ntBASIC17.75■□□□□ 0.43
SCUBE3Q8IX30 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms