Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 AL590787.1-201ENST00000568856 1315 ntBASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 STK19B-204ENST00000512515 211 ntBASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 MIR6805-201ENST00000615055 62 ntBASIC15.31■□□□□ 0.04
RP1L1Q8IWN7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 KRT8P23-201ENST00000560090 1207 ntBASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 AL135999.2-201ENST00000622438 1686 ntBASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 AC012317.2-201ENST00000623305 2251 ntBASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RP1L1Q8IWN7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 LINC00982-205ENST00000420957 435 ntBASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 AC009118.2-201ENST00000613275 655 ntBASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 MIR1909-201ENST00000411312 80 ntBASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 SPDYE7P-202ENST00000420373 878 ntBASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
RP1L1Q8IWN7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms