Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC83Q8IWF9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CCDC83Q8IWF9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC83Q8IWF9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC83Q8IWF9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC83Q8IWF9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC83Q8IWF9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 RBM17P3-201ENST00000417687 1192 ntBASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 SART3-203ENST00000546611 1184 ntBASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 KRT8P49-201ENST00000604166 1432 ntBASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 LINC00895-201ENST00000629028 1637 ntBASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC83Q8IWF9 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 AL139424.1-201ENST00000607572 797 ntBASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC83Q8IWF9 AC005052.1-201ENST00000625181 2492 ntBASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 FGFR3P6-201ENST00000457012 610 ntBASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 AL355877.3-201ENST00000622820 899 ntBASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC83Q8IWF9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC83Q8IWF9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC83Q8IWF9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC83Q8IWF9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CCDC83Q8IWF9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC83Q8IWF9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC83Q8IWF9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms