Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 SART3-203ENST00000546611 1184 ntBASIC15.91■□□□□ 0.14
CCDC71Q8IV32 AC021087.4-201ENST00000563761 564 ntBASIC15.91■□□□□ 0.14
CCDC71Q8IV32 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 AP005117.1-201ENST00000584346 1413 ntBASIC15.91■□□□□ 0.14
CCDC71Q8IV32 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC71Q8IV32 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 RPS2P28-201ENST00000314255 741 ntBASIC15.9■□□□□ 0.14
CCDC71Q8IV32 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 RPS2P1-201ENST00000434010 821 ntBASIC15.9■□□□□ 0.14
CCDC71Q8IV32 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 PMS2P7-201ENST00000506558 1336 ntBASIC15.9■□□□□ 0.14
CCDC71Q8IV32 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCDC71Q8IV32 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CCDC71Q8IV32 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC71Q8IV32 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC71Q8IV32 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC71Q8IV32 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCDC71Q8IV32 ZNF259P1-201ENST00000407656 1365 ntBASIC15.89■□□□□ 0.13
CCDC71Q8IV32 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CCDC71Q8IV32 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC71Q8IV32 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.89■□□□□ 0.13
CCDC71Q8IV32 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC71Q8IV32 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms