Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LRRC28Q86X40 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.12■□□□□ 0.01
LRRC28Q86X40 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRC28Q86X40 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 PKD1P5-201ENST00000532415 10291 ntBASIC15.11■□□□□ 0.01
LRRC28Q86X40 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
LRRC28Q86X40 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 KRT18P65-201ENST00000439811 1286 ntBASIC15.11■□□□□ 0.01
LRRC28Q86X40 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRC28Q86X40 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.11■□□□□ 0.01
LRRC28Q86X40 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.11■□□□□ 0.01
LRRC28Q86X40 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRC28Q86X40 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.11■□□□□ 0.01
LRRC28Q86X40 AL353801.3-201ENST00000609898 542 ntBASIC15.11■□□□□ 0.01
LRRC28Q86X40 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LRRC28Q86X40 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRC28Q86X40 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 AL365203.3-201ENST00000609742 2057 ntBASIC15.11■□□□□ 0.01
LRRC28Q86X40 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRC28Q86X40 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LRRC28Q86X40 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 PAUPAR-201ENST00000630360 2965 ntBASIC15.11■□□□□ 0.01
LRRC28Q86X40 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.11■□□□□ 0.01
LRRC28Q86X40 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LRRC28Q86X40 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LRRC28Q86X40 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
LRRC28Q86X40 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 DUSP5P1-201ENST00000441325 1139 ntBASIC15.1■□□□□ 0.01
LRRC28Q86X40 AC104819.1-201ENST00000504587 486 ntBASIC15.1■□□□□ 0.01
LRRC28Q86X40 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 PRELID1P1-202ENST00000567272 903 ntBASIC15.1■□□□□ 0.01
LRRC28Q86X40 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 AC024909.3-201ENST00000611513 2257 ntBASIC15.1■□□□□ 0.01
LRRC28Q86X40 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LRRC28Q86X40 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LRRC28Q86X40 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LRRC28Q86X40 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRRC28Q86X40 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms