Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 DUX4L26-201ENST00000489078 1255 ntBASIC15.35■□□□□ 0.05
SHFQ7M4L6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 AC009533.2-201ENST00000543664 586 ntBASIC15.35■□□□□ 0.05
SHFQ7M4L6 AL136038.3-201ENST00000561909 1096 ntBASIC15.35■□□□□ 0.05
SHFQ7M4L6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.35■□□□□ 0.05
SHFQ7M4L6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SHFQ7M4L6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 AC103702.1-201ENST00000548801 2630 ntBASIC15.34■□□□□ 0.05
SHFQ7M4L6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 STK25P1-201ENST00000585406 838 ntBASIC15.34■□□□□ 0.05
SHFQ7M4L6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 AC005052.1-201ENST00000625181 2492 ntBASIC15.34■□□□□ 0.05
SHFQ7M4L6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.34■□□□□ 0.05
SHFQ7M4L6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHFQ7M4L6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.33■□□□□ 0.05
SHFQ7M4L6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.33■□□□□ 0.05
SHFQ7M4L6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SHFQ7M4L6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
SHFQ7M4L6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SHFQ7M4L6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
SHFQ7M4L6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SHFQ7M4L6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SHFQ7M4L6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
SHFQ7M4L6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.33■□□□□ 0.04
SHFQ7M4L6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
SHFQ7M4L6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.33■□□□□ 0.04
SHFQ7M4L6 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.33■□□□□ 0.04
SHFQ7M4L6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHFQ7M4L6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SHFQ7M4L6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.04
SHFQ7M4L6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.33■□□□□ 0.04
SHFQ7M4L6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms