Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR600HG-201ENST00000449175 5984 ntBASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 IGHGP-201ENST00000390555 1178 ntBASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 KRT8P26-201ENST00000534154 1276 ntBASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PPP4R4Q6NUP7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 AC079328.2-201ENST00000561241 3354 ntBASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 AC024909.3-201ENST00000611513 2257 ntBASIC16.28■□□□□ 0.2
PPP4R4Q6NUP7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 HYMAI-201ENST00000635591 3347 ntBASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 AL353692.3-201ENST00000407031 1396 ntBASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 KRT8P47-201ENST00000604727 1398 ntBASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 CHCHD2P8-201ENST00000429873 447 ntBASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 GUSBP12-201ENST00000513727 720 ntBASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 AP002414.4-201ENST00000589764 1148 ntBASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PPP4R4Q6NUP7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PPP4R4Q6NUP7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.27■□□□□ 0.19
PPP4R4Q6NUP7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms