Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 MIR574-201ENST00000385209 96 ntBASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 RHOQP3-201ENST00000437982 621 ntBASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 AC091167.2-201ENST00000579581 588 ntBASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 AC005412.3-201ENST00000580309 715 ntBASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PPP4R3AQ6IN85 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 AP000347.1-202ENST00000435868 847 ntBASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 AP002490.2-201ENST00000524791 560 ntBASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 MPDU1-223ENST00000582151 728 ntBASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 AL353732.1-201ENST00000569618 1459 ntBASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PPP4R3AQ6IN85 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 LINC00895-201ENST00000629028 1637 ntBASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 AC124067.4-201ENST00000519691 2379 ntBASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 KRT18P2-201ENST00000447938 1258 ntBASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 MIR4492-201ENST00000581627 80 ntBASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 AC140113.2-201ENST00000604370 208 ntBASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 AC013467.2-201ENST00000605472 835 ntBASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 AC005915.1-201ENST00000624912 2018 ntBASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP4R3AQ6IN85 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R3AQ6IN85 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
PPP4R3AQ6IN85 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PPP4R3AQ6IN85 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R3AQ6IN85 SLC22A20-204ENST00000530038 1673 ntBASIC19.17■□□□□ 0.66
PPP4R3AQ6IN85 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP4R3AQ6IN85 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms