Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 AL450487.1-201ENST00000426799 995 ntBASIC20.21■□□□□ 0.83
RNF20Q5VTR2 KRT18P67-201ENST00000432816 1264 ntBASIC20.21■□□□□ 0.83
RNF20Q5VTR2 FAAHP1-202ENST00000446499 1238 ntBASIC20.21■□□□□ 0.83
RNF20Q5VTR2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 RPS15P9-201ENST00000494093 319 ntBASIC20.21■□□□□ 0.83
RNF20Q5VTR2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 GGTLC5P-201ENST00000617623 998 ntBASIC20.21■□□□□ 0.83
RNF20Q5VTR2 MIR1199-201ENST00000621445 119 ntBASIC20.21■□□□□ 0.83
RNF20Q5VTR2 AC008735.5-201ENST00000623544 497 ntBASIC20.21■□□□□ 0.83
RNF20Q5VTR2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF20Q5VTR2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
RNF20Q5VTR2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 AL118508.1-201ENST00000613502 2345 ntBASIC20.2■□□□□ 0.82
RNF20Q5VTR2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 AL603756.1-201ENST00000606511 2163 ntBASIC20.2■□□□□ 0.82
RNF20Q5VTR2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 AC073621.1-201ENST00000392730 636 ntBASIC20.2■□□□□ 0.82
RNF20Q5VTR2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 AC018712.1-201ENST00000455767 687 ntBASIC20.2■□□□□ 0.82
RNF20Q5VTR2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 RN7SL510P-201ENST00000581311 263 ntBASIC20.2■□□□□ 0.82
RNF20Q5VTR2 AC013467.2-201ENST00000605472 835 ntBASIC20.2■□□□□ 0.82
RNF20Q5VTR2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 AL691432.3-201ENST00000621860 400 ntBASIC20.2■□□□□ 0.82
RNF20Q5VTR2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF20Q5VTR2 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 PGM5P2-202ENST00000637225 1043 ntBASIC20.19■□□□□ 0.82
RNF20Q5VTR2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF20Q5VTR2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms