Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 BX664615.1-201ENST00000443558 458 ntBASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 AL353801.3-201ENST00000609898 542 ntBASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
LINC00242Q5T6M2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 AC132938.5-201ENST00000624980 1813 ntBASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 KLF4P1-201ENST00000412782 1185 ntBASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 AC112907.2-201ENST00000448639 330 ntBASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 RN7SL606P-201ENST00000472779 293 ntBASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 AC005336.2-201ENST00000593183 939 ntBASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 TMEM191A-211ENST00000637163 1067 ntBASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
LINC00242Q5T6M2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms