Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 MTCYBP32-201ENST00000427945 1084 ntBASIC12.78□□□□□ -0.36
LINC01559Q495D7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.78□□□□□ -0.36
LINC01559Q495D7 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 AL353718.1-201ENST00000451028 517 ntBASIC12.78□□□□□ -0.36
LINC01559Q495D7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 AL357094.1-201ENST00000603845 844 ntBASIC12.78□□□□□ -0.36
LINC01559Q495D7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.78□□□□□ -0.36
LINC01559Q495D7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LINC01559Q495D7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01559Q495D7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
LINC01559Q495D7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01559Q495D7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01559Q495D7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01559Q495D7 PCDHB17P-201ENST00000539533 2393 ntBASIC12.77□□□□□ -0.36
LINC01559Q495D7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC01559Q495D7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01559Q495D7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01559Q495D7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01559Q495D7 MMP23A-201ENST00000234610 1017 ntBASIC12.77□□□□□ -0.37
LINC01559Q495D7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01559Q495D7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01559Q495D7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01559Q495D7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 SNORA78-201ENST00000459373 127 ntBASIC12.77□□□□□ -0.37
LINC01559Q495D7 AP003733.1-201ENST00000491725 852 ntBASIC12.77□□□□□ -0.37
LINC01559Q495D7 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 AP002490.2-201ENST00000524791 560 ntBASIC12.77□□□□□ -0.37
LINC01559Q495D7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 ADAL-204ENST00000562188 1228 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 AC109462.3-201ENST00000573934 613 ntBASIC12.77□□□□□ -0.37
LINC01559Q495D7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 BNIP3P39-201ENST00000601077 554 ntBASIC12.77□□□□□ -0.37
LINC01559Q495D7 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01559Q495D7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01559Q495D7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01559Q495D7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC01559Q495D7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC01559Q495D7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms