Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRFAM7AQ494W8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 PCDHA14-201ENST00000506751 2298 ntBASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 GPX1P2-201ENST00000429271 606 ntBASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 AC126755.1-201ENST00000525846 6405 ntBASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRFAM7AQ494W8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 RPSAP43-201ENST00000402237 625 ntBASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 HNRNPDP1-201ENST00000439535 754 ntBASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 AC004967.1-201ENST00000453589 447 ntBASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 AC040169.1-201ENST00000565382 521 ntBASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRFAM7AQ494W8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CHRFAM7AQ494W8 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRFAM7AQ494W8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRFAM7AQ494W8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRFAM7AQ494W8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRFAM7AQ494W8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRFAM7AQ494W8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRFAM7AQ494W8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRFAM7AQ494W8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms