Protein–RNA interactions for Protein: Q2TBA0

KLHL40, Kelch-like protein 40, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL40Q2TBA0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL40Q2TBA0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.45■□□□□ 0.7
KLHL40Q2TBA0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL40Q2TBA0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
KLHL40Q2TBA0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.45■□□□□ 0.7
KLHL40Q2TBA0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.45■□□□□ 0.7
KLHL40Q2TBA0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.45■□□□□ 0.7
KLHL40Q2TBA0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL40Q2TBA0 GGT4P-201ENST00000623672 1708 ntBASIC19.45■□□□□ 0.7
KLHL40Q2TBA0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL40Q2TBA0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KLHL40Q2TBA0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 AL139011.1-202ENST00000642063 584 ntBASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KLHL40Q2TBA0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 GGT3P-204ENST00000453783 1664 ntBASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 STK19B-204ENST00000512515 211 ntBASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 AC141257.4-201ENST00000634557 245 ntBASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 AC136944.6-201ENST00000634818 245 ntBASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 TNRC18P2-201ENST00000417666 2714 ntBASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 AC002310.6-201ENST00000624451 1377 ntBASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 AC006058.4-201ENST00000624016 1670 ntBASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
KLHL40Q2TBA0 AC006449.6-201ENST00000612330 2296 ntBASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 AC087499.1-201ENST00000418141 1075 ntBASIC19.42■□□□□ 0.7
KLHL40Q2TBA0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms