Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.78■□□□□ 0.92
DDR1Q08345 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
DDR1Q08345 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
DDR1Q08345 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
DDR1Q08345 BICD1-207ENST00000551848 1962 ntBASIC20.77■□□□□ 0.92
DDR1Q08345 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
DDR1Q08345 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
DDR1Q08345 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.77■□□□□ 0.92
DDR1Q08345 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 RN7SL837P-201ENST00000463010 287 ntBASIC20.77■□□□□ 0.92
DDR1Q08345 AC119751.2-201ENST00000504529 210 ntBASIC20.77■□□□□ 0.92
DDR1Q08345 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.77■□□□□ 0.92
DDR1Q08345 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.77■□□□□ 0.92
DDR1Q08345 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.77■□□□□ 0.92
DDR1Q08345 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.77■□□□□ 0.92
DDR1Q08345 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.77■□□□□ 0.92
DDR1Q08345 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
DDR1Q08345 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
DDR1Q08345 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
DDR1Q08345 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
DDR1Q08345 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.77■□□□□ 0.91
DDR1Q08345 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.77■□□□□ 0.91
DDR1Q08345 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
DDR1Q08345 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDR1Q08345 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDR1Q08345 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDR1Q08345 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDR1Q08345 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.76■□□□□ 0.91
DDR1Q08345 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.76■□□□□ 0.91
DDR1Q08345 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDR1Q08345 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
DDR1Q08345 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
DDR1Q08345 SLC7A15P-201ENST00000424028 1363 ntBASIC20.76■□□□□ 0.91
DDR1Q08345 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
DDR1Q08345 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
DDR1Q08345 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
DDR1Q08345 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDR1Q08345 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
DDR1Q08345 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDR1Q08345 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.76■□□□□ 0.91
DDR1Q08345 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDR1Q08345 RN7SL618P-201ENST00000477850 296 ntBASIC20.76■□□□□ 0.91
DDR1Q08345 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.76■□□□□ 0.91
DDR1Q08345 AC098859.1-201ENST00000502915 1238 ntBASIC20.76■□□□□ 0.91
DDR1Q08345 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.76■□□□□ 0.91
DDR1Q08345 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDR1Q08345 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.76■□□□□ 0.91
DDR1Q08345 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
DDR1Q08345 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDR1Q08345 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
DDR1Q08345 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
DDR1Q08345 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.76■□□□□ 0.91
DDR1Q08345 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.76■□□□□ 0.91
DDR1Q08345 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDR1Q08345 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
DDR1Q08345 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.76■□□□□ 0.91
DDR1Q08345 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDR1Q08345 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
DDR1Q08345 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDR1Q08345 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.75■□□□□ 0.91
DDR1Q08345 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.75■□□□□ 0.91
DDR1Q08345 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.75■□□□□ 0.91
DDR1Q08345 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDR1Q08345 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDR1Q08345 AL021920.2-201ENST00000624828 1351 ntBASIC20.75■□□□□ 0.91
DDR1Q08345 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDR1Q08345 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DDR1Q08345 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
DDR1Q08345 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.75■□□□□ 0.91
DDR1Q08345 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.75■□□□□ 0.91
DDR1Q08345 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.75■□□□□ 0.91
DDR1Q08345 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
DDR1Q08345 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.75■□□□□ 0.91
DDR1Q08345 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
DDR1Q08345 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DDR1Q08345 RNA5SP410-201ENST00000516285 106 ntBASIC20.75■□□□□ 0.91
DDR1Q08345 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.75■□□□□ 0.91
DDR1Q08345 TEX48-202ENST00000612244 662 ntTSL 3 BASIC20.75■□□□□ 0.91
DDR1Q08345 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms