Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.33■□□□□ 0.21
PCDH1Q08174 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH1Q08174 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH1Q08174 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH1Q08174 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDH1Q08174 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDH1Q08174 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDH1Q08174 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDH1Q08174 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH1Q08174 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH1Q08174 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH1Q08174 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDH1Q08174 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH1Q08174 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH1Q08174 FAAHP1-202ENST00000446499 1238 ntBASIC16.33■□□□□ 0.2
PCDH1Q08174 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH1Q08174 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH1Q08174 AC073648.2-201ENST00000510116 352 ntBASIC16.33■□□□□ 0.2
PCDH1Q08174 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH1Q08174 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDH1Q08174 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDH1Q08174 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH1Q08174 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH1Q08174 AC008667.4-201ENST00000607370 168 ntBASIC16.33■□□□□ 0.2
PCDH1Q08174 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH1Q08174 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCDH1Q08174 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
PCDH1Q08174 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH1Q08174 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH1Q08174 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDH1Q08174 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
PCDH1Q08174 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH1Q08174 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH1Q08174 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH1Q08174 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PCDH1Q08174 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH1Q08174 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH1Q08174 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH1Q08174 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH1Q08174 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH1Q08174 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH1Q08174 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDH1Q08174 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
PCDH1Q08174 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.33■□□□□ 0.2
PCDH1Q08174 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH1Q08174 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PCDH1Q08174 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH1Q08174 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDH1Q08174 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH1Q08174 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH1Q08174 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
PCDH1Q08174 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH1Q08174 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDH1Q08174 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH1Q08174 AL450487.1-201ENST00000426799 995 ntBASIC16.32■□□□□ 0.2
PCDH1Q08174 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PCDH1Q08174 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.32■□□□□ 0.2
PCDH1Q08174 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH1Q08174 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH1Q08174 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDH1Q08174 RPS15P9-201ENST00000494093 319 ntBASIC16.32■□□□□ 0.2
PCDH1Q08174 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDH1Q08174 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 AC136632.2-201ENST00000512891 861 ntBASIC16.32■□□□□ 0.2
PCDH1Q08174 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH1Q08174 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH1Q08174 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH1Q08174 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.32■□□□□ 0.2
PCDH1Q08174 AC006538.1-201ENST00000567905 1585 ntBASIC16.32■□□□□ 0.2
PCDH1Q08174 AC091167.2-201ENST00000579581 588 ntBASIC16.32■□□□□ 0.2
PCDH1Q08174 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 AL691432.3-201ENST00000621860 400 ntBASIC16.32■□□□□ 0.2
PCDH1Q08174 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH1Q08174 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH1Q08174 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH1Q08174 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH1Q08174 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH1Q08174 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDH1Q08174 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH1Q08174 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH1Q08174 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDH1Q08174 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDH1Q08174 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH1Q08174 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH1Q08174 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDH1Q08174 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms