Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC132872.4-202ENST00000622924 2756 ntBASIC14.69□□□□□ -0.06
UBA52P62987 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 AL353692.3-201ENST00000407031 1396 ntBASIC14.69□□□□□ -0.06
UBA52P62987 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
UBA52P62987 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
UBA52P62987 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.69□□□□□ -0.06
UBA52P62987 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
UBA52P62987 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
UBA52P62987 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
UBA52P62987 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.68□□□□□ -0.06
UBA52P62987 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
UBA52P62987 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
UBA52P62987 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
UBA52P62987 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.68□□□□□ -0.06
UBA52P62987 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.68□□□□□ -0.06
UBA52P62987 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.68□□□□□ -0.06
UBA52P62987 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
UBA52P62987 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
UBA52P62987 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
UBA52P62987 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.68□□□□□ -0.06
UBA52P62987 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC14.68□□□□□ -0.06
UBA52P62987 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.68□□□□□ -0.06
UBA52P62987 KRT18P41-201ENST00000518924 1277 ntBASIC14.68□□□□□ -0.06
UBA52P62987 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.68□□□□□ -0.06
UBA52P62987 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
UBA52P62987 AP005901.3-202ENST00000581653 237 ntBASIC14.68□□□□□ -0.06
UBA52P62987 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
UBA52P62987 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
UBA52P62987 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.68□□□□□ -0.06
UBA52P62987 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
UBA52P62987 KRT89P-201ENST00000620027 1478 ntBASIC14.68□□□□□ -0.06
UBA52P62987 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
UBA52P62987 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
UBA52P62987 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.68□□□□□ -0.06
UBA52P62987 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
UBA52P62987 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.67□□□□□ -0.06
UBA52P62987 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
UBA52P62987 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.67□□□□□ -0.06
UBA52P62987 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
UBA52P62987 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
UBA52P62987 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.67□□□□□ -0.06
UBA52P62987 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.67□□□□□ -0.06
UBA52P62987 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.67□□□□□ -0.06
UBA52P62987 AF238378.1-201ENST00000526806 358 ntBASIC14.67□□□□□ -0.06
UBA52P62987 AP001005.1-201ENST00000571755 1248 ntBASIC14.67□□□□□ -0.06
UBA52P62987 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
UBA52P62987 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.67□□□□□ -0.06
UBA52P62987 AC117500.6-201ENST00000624871 588 ntBASIC14.67□□□□□ -0.06
UBA52P62987 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.67□□□□□ -0.06
UBA52P62987 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
UBA52P62987 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.67□□□□□ -0.06
UBA52P62987 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.67□□□□□ -0.06
UBA52P62987 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
UBA52P62987 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.67□□□□□ -0.06
UBA52P62987 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
UBA52P62987 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.67□□□□□ -0.06
UBA52P62987 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBA52P62987 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms