Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
GFERP55789 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.11■□□□□ 0.17
GFERP55789 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GFERP55789 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
GFERP55789 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GFERP55789 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
GFERP55789 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.11■□□□□ 0.17
GFERP55789 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.11■□□□□ 0.17
GFERP55789 MIR4492-201ENST00000581627 80 ntBASIC16.11■□□□□ 0.17
GFERP55789 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.11■□□□□ 0.17
GFERP55789 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.11■□□□□ 0.17
GFERP55789 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GFERP55789 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.11■□□□□ 0.17
GFERP55789 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GFERP55789 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GFERP55789 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GFERP55789 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GFERP55789 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GFERP55789 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GFERP55789 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
GFERP55789 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GFERP55789 AC016027.1-202ENST00000607927 1699 ntBASIC16.11■□□□□ 0.17
GFERP55789 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
GFERP55789 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GFERP55789 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
GFERP55789 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
GFERP55789 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
GFERP55789 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
GFERP55789 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.1■□□□□ 0.17
GFERP55789 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.1■□□□□ 0.17
GFERP55789 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
GFERP55789 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.1■□□□□ 0.17
GFERP55789 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.1■□□□□ 0.17
GFERP55789 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.1■□□□□ 0.17
GFERP55789 AC093512.1-201ENST00000617969 520 ntBASIC16.1■□□□□ 0.17
GFERP55789 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.1■□□□□ 0.17
GFERP55789 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
GFERP55789 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.1■□□□□ 0.17
GFERP55789 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.1■□□□□ 0.17
GFERP55789 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.1■□□□□ 0.17
GFERP55789 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GFERP55789 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.1■□□□□ 0.17
GFERP55789 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GFERP55789 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.1■□□□□ 0.17
GFERP55789 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
GFERP55789 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GFERP55789 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.1■□□□□ 0.17
GFERP55789 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GFERP55789 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GFERP55789 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.09■□□□□ 0.17
GFERP55789 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.09■□□□□ 0.17
GFERP55789 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.09■□□□□ 0.17
GFERP55789 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GFERP55789 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GFERP55789 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GFERP55789 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GFERP55789 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
GFERP55789 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GFERP55789 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GFERP55789 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
GFERP55789 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GFERP55789 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GFERP55789 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GFERP55789 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GFERP55789 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.09■□□□□ 0.17
GFERP55789 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.09■□□□□ 0.17
GFERP55789 PMS2P4-201ENST00000412466 1052 ntBASIC16.09■□□□□ 0.17
GFERP55789 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GFERP55789 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
GFERP55789 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.09■□□□□ 0.17
GFERP55789 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.09■□□□□ 0.17
GFERP55789 IGHV3-62-201ENST00000520057 340 ntBASIC16.09■□□□□ 0.17
GFERP55789 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
GFERP55789 AC025678.2-201ENST00000562061 970 ntBASIC16.09■□□□□ 0.17
GFERP55789 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.09■□□□□ 0.17
GFERP55789 MIR3909-201ENST00000579518 119 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms