Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NR1H2P55055 AC092364.2-201ENST00000596710 2692 ntBASIC16.11■□□□□ 0.17
NR1H2P55055 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H2P55055 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H2P55055 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
NR1H2P55055 HLA-F-220ENST00000434407 884 ntBASIC16.11■□□□□ 0.17
NR1H2P55055 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.11■□□□□ 0.17
NR1H2P55055 TSSC2-201ENST00000450217 709 ntBASIC16.11■□□□□ 0.17
NR1H2P55055 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.11■□□□□ 0.17
NR1H2P55055 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.11■□□□□ 0.17
NR1H2P55055 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H2P55055 AC104390.1-201ENST00000555663 520 ntBASIC16.11■□□□□ 0.17
NR1H2P55055 AC009065.1-201ENST00000564055 1225 ntBASIC16.11■□□□□ 0.17
NR1H2P55055 MIR3180-4-201ENST00000582223 153 ntBASIC16.11■□□□□ 0.17
NR1H2P55055 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H2P55055 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H2P55055 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H2P55055 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H2P55055 AC022898.2-201ENST00000616822 1312 ntBASIC16.11■□□□□ 0.17
NR1H2P55055 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NR1H2P55055 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H2P55055 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H2P55055 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H2P55055 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H2P55055 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H2P55055 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.11■□□□□ 0.17
NR1H2P55055 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H2P55055 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NR1H2P55055 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NR1H2P55055 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NR1H2P55055 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.1■□□□□ 0.17
NR1H2P55055 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NR1H2P55055 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.1■□□□□ 0.17
NR1H2P55055 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
NR1H2P55055 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.1■□□□□ 0.17
NR1H2P55055 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.1■□□□□ 0.17
NR1H2P55055 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.1■□□□□ 0.17
NR1H2P55055 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.1■□□□□ 0.17
NR1H2P55055 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.1■□□□□ 0.17
NR1H2P55055 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.1■□□□□ 0.17
NR1H2P55055 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.1■□□□□ 0.17
NR1H2P55055 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NR1H2P55055 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.1■□□□□ 0.17
NR1H2P55055 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.1■□□□□ 0.17
NR1H2P55055 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.1■□□□□ 0.17
NR1H2P55055 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NR1H2P55055 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.1■□□□□ 0.17
NR1H2P55055 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NR1H2P55055 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NR1H2P55055 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.09■□□□□ 0.17
NR1H2P55055 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.09■□□□□ 0.17
NR1H2P55055 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.09■□□□□ 0.17
NR1H2P55055 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.09■□□□□ 0.17
NR1H2P55055 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NR1H2P55055 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NR1H2P55055 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.09■□□□□ 0.17
NR1H2P55055 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms