Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA4P54764 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA4P54764 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA4P54764 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.25■□□□□ 0.19
EPHA4P54764 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA4P54764 TUBB8P12-201ENST00000308911 1335 ntBASIC16.25■□□□□ 0.19
EPHA4P54764 TUBB7P-202ENST00000428444 1305 ntBASIC16.25■□□□□ 0.19
EPHA4P54764 TUBB8P7-204ENST00000567960 1332 ntBASIC16.25■□□□□ 0.19
EPHA4P54764 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
EPHA4P54764 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
EPHA4P54764 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA4P54764 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
EPHA4P54764 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.25■□□□□ 0.19
EPHA4P54764 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
EPHA4P54764 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
EPHA4P54764 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA4P54764 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
EPHA4P54764 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA4P54764 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.25■□□□□ 0.19
EPHA4P54764 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.25■□□□□ 0.19
EPHA4P54764 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.25■□□□□ 0.19
EPHA4P54764 HLA-J-203ENST00000494367 1087 ntBASIC16.25■□□□□ 0.19
EPHA4P54764 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.25■□□□□ 0.19
EPHA4P54764 KRT8P48-201ENST00000515599 1220 ntBASIC16.25■□□□□ 0.19
EPHA4P54764 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.25■□□□□ 0.19
EPHA4P54764 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA4P54764 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.25■□□□□ 0.19
EPHA4P54764 AC244517.3-201ENST00000616254 1235 ntBASIC16.25■□□□□ 0.19
EPHA4P54764 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.25■□□□□ 0.19
EPHA4P54764 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
EPHA4P54764 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA4P54764 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA4P54764 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.25■□□□□ 0.19
EPHA4P54764 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.25■□□□□ 0.19
EPHA4P54764 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA4P54764 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA4P54764 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
EPHA4P54764 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
EPHA4P54764 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
EPHA4P54764 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.24■□□□□ 0.19
EPHA4P54764 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
EPHA4P54764 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
EPHA4P54764 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.24■□□□□ 0.19
EPHA4P54764 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.24■□□□□ 0.19
EPHA4P54764 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.24■□□□□ 0.19
EPHA4P54764 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 AL627223.1-201ENST00000416693 442 ntBASIC16.24■□□□□ 0.19
EPHA4P54764 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.24■□□□□ 0.19
EPHA4P54764 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.24■□□□□ 0.19
EPHA4P54764 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.24■□□□□ 0.19
EPHA4P54764 AC079140.1-201ENST00000508039 487 ntBASIC16.24■□□□□ 0.19
EPHA4P54764 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.24■□□□□ 0.19
EPHA4P54764 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
EPHA4P54764 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
EPHA4P54764 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
EPHA4P54764 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.24■□□□□ 0.19
EPHA4P54764 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.24■□□□□ 0.19
EPHA4P54764 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.24■□□□□ 0.19
EPHA4P54764 AC009093.7-201ENST00000623853 1223 ntBASIC16.24■□□□□ 0.19
EPHA4P54764 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
EPHA4P54764 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.24■□□□□ 0.19
EPHA4P54764 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
EPHA4P54764 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
EPHA4P54764 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
EPHA4P54764 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
EPHA4P54764 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.23■□□□□ 0.19
EPHA4P54764 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
EPHA4P54764 WASH6P-202ENST00000359512 1437 ntBASIC16.23■□□□□ 0.19
EPHA4P54764 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
EPHA4P54764 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.23■□□□□ 0.19
EPHA4P54764 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.23■□□□□ 0.19
EPHA4P54764 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.23■□□□□ 0.19
EPHA4P54764 CYMP-203ENST00000474680 1263 ntBASIC16.23■□□□□ 0.19
EPHA4P54764 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.23■□□□□ 0.19
EPHA4P54764 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms