Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.64■□□□□ 0.25
GTF2A1P52655 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 HLA-J-201ENST00000462773 1622 ntBASIC16.64■□□□□ 0.25
GTF2A1P52655 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
GTF2A1P52655 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
GTF2A1P52655 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.64■□□□□ 0.25
GTF2A1P52655 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.64■□□□□ 0.25
GTF2A1P52655 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.64■□□□□ 0.25
GTF2A1P52655 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.64■□□□□ 0.25
GTF2A1P52655 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.64■□□□□ 0.25
GTF2A1P52655 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.64■□□□□ 0.25
GTF2A1P52655 AC092118.2-201ENST00000613495 667 ntBASIC16.64■□□□□ 0.25
GTF2A1P52655 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.64■□□□□ 0.25
GTF2A1P52655 AL121829.2-201ENST00000620908 328 ntBASIC16.64■□□□□ 0.25
GTF2A1P52655 AC092437.1-201ENST00000624794 1048 ntBASIC16.64■□□□□ 0.25
GTF2A1P52655 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GTF2A1P52655 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GTF2A1P52655 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GTF2A1P52655 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.64■□□□□ 0.25
GTF2A1P52655 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GTF2A1P52655 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
GTF2A1P52655 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GTF2A1P52655 PCDHA3-202ENST00000532566 4594 ntBASIC16.63■□□□□ 0.25
GTF2A1P52655 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.63■□□□□ 0.25
GTF2A1P52655 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.63■□□□□ 0.25
GTF2A1P52655 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
GTF2A1P52655 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.63■□□□□ 0.25
GTF2A1P52655 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.63■□□□□ 0.25
GTF2A1P52655 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.63■□□□□ 0.25
GTF2A1P52655 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.63■□□□□ 0.25
GTF2A1P52655 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.63■□□□□ 0.25
GTF2A1P52655 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
GTF2A1P52655 CROCCP5-201ENST00000436658 830 ntBASIC16.63■□□□□ 0.25
GTF2A1P52655 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.63■□□□□ 0.25
GTF2A1P52655 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.63■□□□□ 0.25
GTF2A1P52655 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.63■□□□□ 0.25
GTF2A1P52655 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.63■□□□□ 0.25
GTF2A1P52655 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.63■□□□□ 0.25
GTF2A1P52655 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
GTF2A1P52655 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.63■□□□□ 0.25
GTF2A1P52655 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 GMCL1P1-201ENST00000463439 1581 ntBASIC16.63■□□□□ 0.25
GTF2A1P52655 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 MTHFR-217ENST00000641820 1569 ntBASIC16.63■□□□□ 0.25
GTF2A1P52655 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
GTF2A1P52655 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.63■□□□□ 0.25
GTF2A1P52655 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GTF2A1P52655 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.62■□□□□ 0.25
GTF2A1P52655 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.62■□□□□ 0.25
GTF2A1P52655 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC16.62■□□□□ 0.25
GTF2A1P52655 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
GTF2A1P52655 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
GTF2A1P52655 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.62■□□□□ 0.25
GTF2A1P52655 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.62■□□□□ 0.25
GTF2A1P52655 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GTF2A1P52655 AC026185.1-201ENST00000445748 174 ntBASIC16.62■□□□□ 0.25
GTF2A1P52655 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.62■□□□□ 0.25
GTF2A1P52655 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms