Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDK7P50613 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK7P50613 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.61■□□□□ 0.57
CDK7P50613 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDK7P50613 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 AC022144.1-201ENST00000602255 1580 ntBASIC18.6■□□□□ 0.57
CDK7P50613 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK7P50613 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 AC142381.1-201ENST00000426099 345 ntBASIC18.6■□□□□ 0.57
CDK7P50613 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.6■□□□□ 0.57
CDK7P50613 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.6■□□□□ 0.57
CDK7P50613 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDK7P50613 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.6■□□□□ 0.57
CDK7P50613 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.6■□□□□ 0.57
CDK7P50613 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDK7P50613 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDK7P50613 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.59■□□□□ 0.57
CDK7P50613 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.59■□□□□ 0.57
CDK7P50613 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK7P50613 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDK7P50613 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.59■□□□□ 0.57
CDK7P50613 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.59■□□□□ 0.57
CDK7P50613 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK7P50613 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.59■□□□□ 0.57
CDK7P50613 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.59■□□□□ 0.57
CDK7P50613 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.59■□□□□ 0.57
CDK7P50613 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.59■□□□□ 0.57
CDK7P50613 RARRES2P9-201ENST00000565168 469 ntBASIC18.59■□□□□ 0.57
CDK7P50613 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK7P50613 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
CDK7P50613 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK7P50613 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.59■□□□□ 0.57
CDK7P50613 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 BCL2-203ENST00000589955 5011 ntBASIC18.59■□□□□ 0.57
CDK7P50613 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDK7P50613 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.57
CDK7P50613 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CDK7P50613 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.58■□□□□ 0.57
CDK7P50613 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
CDK7P50613 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDK7P50613 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDK7P50613 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.58■□□□□ 0.57
CDK7P50613 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.58■□□□□ 0.56
CDK7P50613 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK7P50613 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK7P50613 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK7P50613 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CDK7P50613 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.58■□□□□ 0.56
CDK7P50613 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK7P50613 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.58■□□□□ 0.56
CDK7P50613 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDK7P50613 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDK7P50613 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.58■□□□□ 0.56
CDK7P50613 AL138828.2-201ENST00000615812 383 ntBASIC18.58■□□□□ 0.56
CDK7P50613 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CDK7P50613 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDK7P50613 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDK7P50613 AP3S2-216ENST00000617003 1561 ntBASIC18.58■□□□□ 0.56
CDK7P50613 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
CDK7P50613 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK7P50613 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CDK7P50613 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK7P50613 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CDK7P50613 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDK7P50613 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.58■□□□□ 0.56
CDK7P50613 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.58■□□□□ 0.56
CDK7P50613 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms