Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF4P48230 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF4P48230 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.02■□□□□ 0.64
TM4SF4P48230 RNA5SP412-201ENST00000516234 123 ntBASIC19.02■□□□□ 0.64
TM4SF4P48230 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.02■□□□□ 0.64
TM4SF4P48230 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.02■□□□□ 0.64
TM4SF4P48230 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.02■□□□□ 0.64
TM4SF4P48230 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TM4SF4P48230 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TM4SF4P48230 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.02■□□□□ 0.64
TM4SF4P48230 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TM4SF4P48230 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.02■□□□□ 0.63
TM4SF4P48230 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
TM4SF4P48230 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.02■□□□□ 0.63
TM4SF4P48230 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TM4SF4P48230 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.02■□□□□ 0.63
TM4SF4P48230 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TM4SF4P48230 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TM4SF4P48230 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.01■□□□□ 0.63
TM4SF4P48230 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF4P48230 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.01■□□□□ 0.63
TM4SF4P48230 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.01■□□□□ 0.63
TM4SF4P48230 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF4P48230 CDC14C-201ENST00000428251 1719 ntBASIC19.01■□□□□ 0.63
TM4SF4P48230 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TM4SF4P48230 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.01■□□□□ 0.63
TM4SF4P48230 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF4P48230 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.01■□□□□ 0.63
TM4SF4P48230 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF4P48230 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.01■□□□□ 0.63
TM4SF4P48230 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.01■□□□□ 0.63
TM4SF4P48230 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.01■□□□□ 0.63
TM4SF4P48230 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
TM4SF4P48230 MIR6069-201ENST00000620069 79 ntBASIC19.01■□□□□ 0.63
TM4SF4P48230 RPSAP52-203ENST00000622976 1023 ntBASIC19.01■□□□□ 0.63
TM4SF4P48230 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF4P48230 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF4P48230 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TM4SF4P48230 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
TM4SF4P48230 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19■□□□□ 0.63
TM4SF4P48230 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19■□□□□ 0.63
TM4SF4P48230 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19■□□□□ 0.63
TM4SF4P48230 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TM4SF4P48230 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 CTBP2P5-201ENST00000454986 1264 ntBASIC19■□□□□ 0.63
TM4SF4P48230 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC19■□□□□ 0.63
TM4SF4P48230 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19■□□□□ 0.63
TM4SF4P48230 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 AC233724.13-201ENST00000598383 410 ntBASIC19■□□□□ 0.63
TM4SF4P48230 RETN-203ENST00000629642 400 ntTSL 5 BASIC19■□□□□ 0.63
TM4SF4P48230 AC018665.1-201ENST00000622927 1362 ntBASIC19■□□□□ 0.63
TM4SF4P48230 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19■□□□□ 0.63
TM4SF4P48230 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TM4SF4P48230 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TM4SF4P48230 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TM4SF4P48230 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
TM4SF4P48230 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
TM4SF4P48230 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19■□□□□ 0.63
TM4SF4P48230 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19■□□□□ 0.63
TM4SF4P48230 FRMD8P1-201ENST00000440433 1524 ntBASIC19■□□□□ 0.63
TM4SF4P48230 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF4P48230 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.99■□□□□ 0.63
TM4SF4P48230 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TM4SF4P48230 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.99■□□□□ 0.63
TM4SF4P48230 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF4P48230 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.99■□□□□ 0.63
TM4SF4P48230 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF4P48230 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF4P48230 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF4P48230 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF4P48230 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF4P48230 AC092506.1-202ENST00000401022 528 ntBASIC18.99■□□□□ 0.63
TM4SF4P48230 BRWD1P1-201ENST00000401091 371 ntBASIC18.99■□□□□ 0.63
TM4SF4P48230 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.99■□□□□ 0.63
TM4SF4P48230 KLF2P4-201ENST00000451959 1225 ntBASIC18.99■□□□□ 0.63
TM4SF4P48230 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.99■□□□□ 0.63
TM4SF4P48230 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.99■□□□□ 0.63
TM4SF4P48230 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TM4SF4P48230 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TM4SF4P48230 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.99■□□□□ 0.63
TM4SF4P48230 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TM4SF4P48230 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF4P48230 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.99■□□□□ 0.63
TM4SF4P48230 PDIA3P1-201ENST00000471856 1510 ntBASIC18.99■□□□□ 0.63
TM4SF4P48230 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TM4SF4P48230 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms