Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
GRIA1P42261 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
GRIA1P42261 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.15■□□□□ 0.34
GRIA1P42261 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
GRIA1P42261 SAPCD2P3-201ENST00000455031 850 ntBASIC17.15■□□□□ 0.34
GRIA1P42261 AP002490.2-201ENST00000524791 560 ntBASIC17.15■□□□□ 0.34
GRIA1P42261 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.15■□□□□ 0.34
GRIA1P42261 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.15■□□□□ 0.34
GRIA1P42261 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GRIA1P42261 IFNL4P1-201ENST00000607083 540 ntBASIC17.15■□□□□ 0.34
GRIA1P42261 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GRIA1P42261 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.15■□□□□ 0.34
GRIA1P42261 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.15■□□□□ 0.34
GRIA1P42261 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GRIA1P42261 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
GRIA1P42261 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GRIA1P42261 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.15■□□□□ 0.34
GRIA1P42261 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GRIA1P42261 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
GRIA1P42261 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
GRIA1P42261 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.14■□□□□ 0.33
GRIA1P42261 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.14■□□□□ 0.33
GRIA1P42261 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.14■□□□□ 0.33
GRIA1P42261 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 ELK2BP-201ENST00000415014 1224 ntBASIC17.14■□□□□ 0.33
GRIA1P42261 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.14■□□□□ 0.33
GRIA1P42261 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
GRIA1P42261 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
GRIA1P42261 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.14■□□□□ 0.33
GRIA1P42261 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.14■□□□□ 0.33
GRIA1P42261 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.14■□□□□ 0.33
GRIA1P42261 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 AC006277.1-201ENST00000624348 1610 ntBASIC17.14■□□□□ 0.33
GRIA1P42261 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GRIA1P42261 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.13■□□□□ 0.33
GRIA1P42261 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.13■□□□□ 0.33
GRIA1P42261 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.13■□□□□ 0.33
GRIA1P42261 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GRIA1P42261 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.13■□□□□ 0.33
GRIA1P42261 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.13■□□□□ 0.33
GRIA1P42261 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.13■□□□□ 0.33
GRIA1P42261 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GRIA1P42261 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.13■□□□□ 0.33
GRIA1P42261 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GRIA1P42261 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
GRIA1P42261 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.13■□□□□ 0.33
GRIA1P42261 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
GRIA1P42261 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.13■□□□□ 0.33
GRIA1P42261 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GRIA1P42261 AL139384.1-201ENST00000612143 3047 ntBASIC17.13■□□□□ 0.33
GRIA1P42261 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GRIA1P42261 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.12■□□□□ 0.33
GRIA1P42261 SNX33P1-201ENST00000592116 1762 ntBASIC17.12■□□□□ 0.33
GRIA1P42261 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GRIA1P42261 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms