Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
USP8P40818 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
USP8P40818 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
USP8P40818 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
USP8P40818 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.5■□□□□ 0.55
USP8P40818 BX005266.1-201ENST00000473402 457 ntBASIC18.5■□□□□ 0.55
USP8P40818 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.5■□□□□ 0.55
USP8P40818 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.5■□□□□ 0.55
USP8P40818 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.5■□□□□ 0.55
USP8P40818 AC091304.2-201ENST00000564639 760 ntBASIC18.5■□□□□ 0.55
USP8P40818 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
USP8P40818 AC012313.10-201ENST00000623509 926 ntBASIC18.5■□□□□ 0.55
USP8P40818 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.5■□□□□ 0.55
USP8P40818 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.5■□□□□ 0.55
USP8P40818 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.5■□□□□ 0.55
USP8P40818 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
USP8P40818 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
USP8P40818 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
USP8P40818 AC079776.2-201ENST00000641154 1609 ntBASIC18.49■□□□□ 0.55
USP8P40818 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.49■□□□□ 0.55
USP8P40818 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.49■□□□□ 0.55
USP8P40818 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.49■□□□□ 0.55
USP8P40818 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.49■□□□□ 0.55
USP8P40818 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.49■□□□□ 0.55
USP8P40818 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.49■□□□□ 0.55
USP8P40818 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.49■□□□□ 0.55
USP8P40818 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
USP8P40818 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.49■□□□□ 0.55
USP8P40818 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.49■□□□□ 0.55
USP8P40818 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
USP8P40818 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.49■□□□□ 0.55
USP8P40818 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP8P40818 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.49■□□□□ 0.55
USP8P40818 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP8P40818 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
USP8P40818 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP8P40818 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.48■□□□□ 0.55
USP8P40818 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP8P40818 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP8P40818 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
USP8P40818 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP8P40818 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP8P40818 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP8P40818 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP8P40818 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.48■□□□□ 0.55
USP8P40818 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.48■□□□□ 0.55
USP8P40818 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.48■□□□□ 0.55
USP8P40818 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.48■□□□□ 0.55
USP8P40818 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP8P40818 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.48■□□□□ 0.55
USP8P40818 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.48■□□□□ 0.55
USP8P40818 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
USP8P40818 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.48■□□□□ 0.55
USP8P40818 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.48■□□□□ 0.55
USP8P40818 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.48■□□□□ 0.55
USP8P40818 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.48■□□□□ 0.55
USP8P40818 MTDHP3-201ENST00000594186 672 ntBASIC18.48■□□□□ 0.55
USP8P40818 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.48■□□□□ 0.55
USP8P40818 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.48■□□□□ 0.55
USP8P40818 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP8P40818 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP8P40818 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.48■□□□□ 0.55
USP8P40818 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP8P40818 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP8P40818 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms