Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGCLP35914 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.82■□□□□ 0.28
HMGCLP35914 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.82■□□□□ 0.28
HMGCLP35914 AC140113.2-201ENST00000604370 208 ntBASIC16.82■□□□□ 0.28
HMGCLP35914 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGCLP35914 AL645728.2-201ENST00000641974 660 ntBASIC16.82■□□□□ 0.28
HMGCLP35914 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HMGCLP35914 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 AL603756.1-201ENST00000606511 2163 ntBASIC16.82■□□□□ 0.28
HMGCLP35914 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGCLP35914 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGCLP35914 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.82■□□□□ 0.28
HMGCLP35914 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.82■□□□□ 0.28
HMGCLP35914 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.82■□□□□ 0.28
HMGCLP35914 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.81■□□□□ 0.28
HMGCLP35914 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCLP35914 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCLP35914 AC012569.1-201ENST00000591191 1524 ntBASIC16.81■□□□□ 0.28
HMGCLP35914 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCLP35914 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCLP35914 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HMGCLP35914 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCLP35914 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGCLP35914 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCLP35914 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGCLP35914 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.81■□□□□ 0.28
HMGCLP35914 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGCLP35914 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCLP35914 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCLP35914 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCLP35914 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCLP35914 MED15P5-201ENST00000423150 992 ntBASIC16.81■□□□□ 0.28
HMGCLP35914 KRT18P2-201ENST00000447938 1258 ntBASIC16.81■□□□□ 0.28
HMGCLP35914 AL513480.1-201ENST00000451731 511 ntBASIC16.81■□□□□ 0.28
HMGCLP35914 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGCLP35914 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
HMGCLP35914 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGCLP35914 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.81■□□□□ 0.28
HMGCLP35914 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGCLP35914 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGCLP35914 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.81■□□□□ 0.28
HMGCLP35914 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGCLP35914 AC007064.4-201ENST00000637740 555 ntBASIC16.81■□□□□ 0.28
HMGCLP35914 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
HMGCLP35914 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGCLP35914 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGCLP35914 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HMGCLP35914 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HMGCLP35914 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCLP35914 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.81■□□□□ 0.28
HMGCLP35914 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGCLP35914 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HMGCLP35914 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.81■□□□□ 0.28
HMGCLP35914 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.8■□□□□ 0.28
HMGCLP35914 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
HMGCLP35914 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.8■□□□□ 0.28
HMGCLP35914 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCLP35914 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HMGCLP35914 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 MIR574-201ENST00000385209 96 ntBASIC16.8■□□□□ 0.28
HMGCLP35914 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.8■□□□□ 0.28
HMGCLP35914 KRT18P3-201ENST00000451602 1288 ntBASIC16.8■□□□□ 0.28
HMGCLP35914 RNA5SP416-201ENST00000516838 111 ntBASIC16.8■□□□□ 0.28
HMGCLP35914 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCLP35914 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
HMGCLP35914 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.8■□□□□ 0.28
HMGCLP35914 CYP2A7P1-201ENST00000595391 815 ntBASIC16.8■□□□□ 0.28
HMGCLP35914 AC023141.13-201ENST00000604991 943 ntBASIC16.8■□□□□ 0.28
HMGCLP35914 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.8■□□□□ 0.28
HMGCLP35914 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCLP35914 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HMGCLP35914 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.8■□□□□ 0.28
HMGCLP35914 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCLP35914 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGCLP35914 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGCLP35914 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCLP35914 FLJ38576-201ENST00000623820 2459 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms