Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.66■□□□□ 0.9
PDE6BP35913 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.66■□□□□ 0.9
PDE6BP35913 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6BP35913 AC016396.2-201ENST00000562575 1417 ntBASIC20.66■□□□□ 0.9
PDE6BP35913 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PDE6BP35913 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.66■□□□□ 0.9
PDE6BP35913 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6BP35913 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE6BP35913 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6BP35913 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6BP35913 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.66■□□□□ 0.9
PDE6BP35913 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6BP35913 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
PDE6BP35913 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6BP35913 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6BP35913 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6BP35913 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
PDE6BP35913 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE6BP35913 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PDE6BP35913 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6BP35913 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.65■□□□□ 0.9
PDE6BP35913 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6BP35913 AL512384.1-201ENST00000406683 331 ntBASIC20.65■□□□□ 0.9
PDE6BP35913 SLC25A6P5-201ENST00000435663 894 ntBASIC20.65■□□□□ 0.9
PDE6BP35913 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6BP35913 GNAQP1-201ENST00000444815 1067 ntBASIC20.65■□□□□ 0.9
PDE6BP35913 AC011495.1-201ENST00000498085 584 ntBASIC20.65■□□□□ 0.9
PDE6BP35913 AC098859.1-201ENST00000502915 1238 ntBASIC20.65■□□□□ 0.9
PDE6BP35913 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6BP35913 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.65■□□□□ 0.9
PDE6BP35913 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE6BP35913 AL079307.3-201ENST00000556114 283 ntBASIC20.65■□□□□ 0.9
PDE6BP35913 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE6BP35913 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PDE6BP35913 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PDE6BP35913 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE6BP35913 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6BP35913 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE6BP35913 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PDE6BP35913 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PDE6BP35913 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6BP35913 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6BP35913 AC009113.1-201ENST00000570267 2443 ntBASIC20.65■□□□□ 0.9
PDE6BP35913 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.65■□□□□ 0.9
PDE6BP35913 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6BP35913 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6BP35913 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PDE6BP35913 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PDE6BP35913 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.64■□□□□ 0.9
PDE6BP35913 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PDE6BP35913 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6BP35913 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.64■□□□□ 0.89
PDE6BP35913 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6BP35913 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6BP35913 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6BP35913 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6BP35913 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6BP35913 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PDE6BP35913 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6BP35913 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6BP35913 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PDE6BP35913 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PDE6BP35913 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.64■□□□□ 0.89
PDE6BP35913 BANF1P1-201ENST00000553684 263 ntBASIC20.64■□□□□ 0.89
PDE6BP35913 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.64■□□□□ 0.89
PDE6BP35913 AL133215.2-201ENST00000609242 977 ntBASIC20.64■□□□□ 0.89
PDE6BP35913 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PDE6BP35913 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6BP35913 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6BP35913 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6BP35913 AC073439.1-201ENST00000624121 1774 ntBASIC20.64■□□□□ 0.89
PDE6BP35913 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6BP35913 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PDE6BP35913 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PDE6BP35913 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6BP35913 FRMD8P1-201ENST00000440433 1524 ntBASIC20.63■□□□□ 0.89
PDE6BP35913 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6BP35913 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE6BP35913 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6BP35913 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PDE6BP35913 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PDE6BP35913 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6BP35913 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE6BP35913 SLC25A1P3-201ENST00000395415 828 ntBASIC20.63■□□□□ 0.89
PDE6BP35913 AL080243.2-201ENST00000418783 582 ntBASIC20.63■□□□□ 0.89
PDE6BP35913 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6BP35913 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.63■□□□□ 0.89
PDE6BP35913 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6BP35913 AC104581.1-202ENST00000635932 2618 ntBASIC20.63■□□□□ 0.89
PDE6BP35913 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6BP35913 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PDE6BP35913 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PDE6BP35913 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.62■□□□□ 0.89
PDE6BP35913 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.62■□□□□ 0.89
PDE6BP35913 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.62■□□□□ 0.89
PDE6BP35913 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE6BP35913 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PDE6BP35913 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.62■□□□□ 0.89
PDE6BP35913 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms