Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 TP73-AS1-207ENST00000624167 988 ntBASIC16.63■□□□□ 0.25
SOX11P35716 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SOX11P35716 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SOX11P35716 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SOX11P35716 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.63■□□□□ 0.25
SOX11P35716 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SOX11P35716 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SOX11P35716 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.63■□□□□ 0.25
SOX11P35716 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.62■□□□□ 0.25
SOX11P35716 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 TP73-AS1-210ENST00000637775 1455 ntBASIC16.62■□□□□ 0.25
SOX11P35716 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.62■□□□□ 0.25
SOX11P35716 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX11P35716 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SOX11P35716 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX11P35716 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.62■□□□□ 0.25
SOX11P35716 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.62■□□□□ 0.25
SOX11P35716 RCN1P2-201ENST00000398357 915 ntBASIC16.62■□□□□ 0.25
SOX11P35716 DDX43P3-201ENST00000441064 443 ntBASIC16.62■□□□□ 0.25
SOX11P35716 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.62■□□□□ 0.25
SOX11P35716 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.62■□□□□ 0.25
SOX11P35716 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.62■□□□□ 0.25
SOX11P35716 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.62■□□□□ 0.25
SOX11P35716 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.62■□□□□ 0.25
SOX11P35716 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX11P35716 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.62■□□□□ 0.25
SOX11P35716 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.62■□□□□ 0.25
SOX11P35716 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
SOX11P35716 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX11P35716 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX11P35716 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SOX11P35716 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 AC092053.1-201ENST00000605787 1936 ntBASIC16.62■□□□□ 0.25
SOX11P35716 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.62■□□□□ 0.25
SOX11P35716 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SOX11P35716 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SOX11P35716 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.61■□□□□ 0.25
SOX11P35716 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX11P35716 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SOX11P35716 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SOX11P35716 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SOX11P35716 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SOX11P35716 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX11P35716 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SOX11P35716 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
SOX11P35716 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX11P35716 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SOX11P35716 AC009533.2-201ENST00000543664 586 ntBASIC16.61■□□□□ 0.25
SOX11P35716 AC132872.1-201ENST00000566986 1195 ntBASIC16.61■□□□□ 0.25
SOX11P35716 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.61■□□□□ 0.25
SOX11P35716 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX11P35716 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SOX11P35716 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms