Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.99■□□□□ 0.79
COL4A5P29400 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A5P29400 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A5P29400 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.98■□□□□ 0.79
COL4A5P29400 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A5P29400 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A5P29400 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A5P29400 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
COL4A5P29400 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.98■□□□□ 0.79
COL4A5P29400 CROCCP4-201ENST00000457096 498 ntBASIC19.98■□□□□ 0.79
COL4A5P29400 AC011495.1-201ENST00000498085 584 ntBASIC19.98■□□□□ 0.79
COL4A5P29400 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.98■□□□□ 0.79
COL4A5P29400 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.98■□□□□ 0.79
COL4A5P29400 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL4A5P29400 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A5P29400 WFDC1-204ENST00000613603 549 ntBASIC19.98■□□□□ 0.79
COL4A5P29400 AL109936.8-201ENST00000641772 604 ntBASIC19.98■□□□□ 0.79
COL4A5P29400 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
COL4A5P29400 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A5P29400 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A5P29400 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.98■□□□□ 0.79
COL4A5P29400 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A5P29400 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A5P29400 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL4A5P29400 KRT8P12-202ENST00000472924 1397 ntBASIC19.98■□□□□ 0.79
COL4A5P29400 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.97■□□□□ 0.79
COL4A5P29400 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A5P29400 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A5P29400 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A5P29400 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.97■□□□□ 0.79
COL4A5P29400 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.97■□□□□ 0.79
COL4A5P29400 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.97■□□□□ 0.79
COL4A5P29400 BNIP3P42-201ENST00000454982 569 ntBASIC19.97■□□□□ 0.79
COL4A5P29400 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.97■□□□□ 0.79
COL4A5P29400 TPRX2P-201ENST00000535362 881 ntBASIC19.97■□□□□ 0.79
COL4A5P29400 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COL4A5P29400 AC061975.2-201ENST00000581722 295 ntBASIC19.97■□□□□ 0.79
COL4A5P29400 BNIP3P29-201ENST00000598302 571 ntBASIC19.97■□□□□ 0.79
COL4A5P29400 AC011447.5-201ENST00000616168 564 ntBASIC19.97■□□□□ 0.79
COL4A5P29400 COX11-210ENST00000639671 696 ntBASIC19.97■□□□□ 0.79
COL4A5P29400 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.97■□□□□ 0.79
COL4A5P29400 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.97■□□□□ 0.79
COL4A5P29400 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
COL4A5P29400 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
COL4A5P29400 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A5P29400 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A5P29400 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A5P29400 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.97■□□□□ 0.79
COL4A5P29400 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.97■□□□□ 0.79
COL4A5P29400 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A5P29400 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.97■□□□□ 0.79
COL4A5P29400 KRT223P-202ENST00000449164 1292 ntBASIC19.97■□□□□ 0.79
COL4A5P29400 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.97■□□□□ 0.79
COL4A5P29400 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.97■□□□□ 0.79
COL4A5P29400 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A5P29400 AC123567.1-201ENST00000548294 1261 ntBASIC19.97■□□□□ 0.79
COL4A5P29400 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.97■□□□□ 0.79
COL4A5P29400 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
COL4A5P29400 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.97■□□□□ 0.79
COL4A5P29400 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.97■□□□□ 0.79
COL4A5P29400 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.97■□□□□ 0.79
COL4A5P29400 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.96■□□□□ 0.79
COL4A5P29400 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.96■□□□□ 0.79
COL4A5P29400 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.96■□□□□ 0.79
COL4A5P29400 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.96■□□□□ 0.79
COL4A5P29400 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.96■□□□□ 0.79
COL4A5P29400 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A5P29400 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL4A5P29400 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A5P29400 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
COL4A5P29400 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A5P29400 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
COL4A5P29400 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A5P29400 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A5P29400 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
COL4A5P29400 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.96■□□□□ 0.79
COL4A5P29400 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.96■□□□□ 0.79
COL4A5P29400 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.96■□□□□ 0.79
COL4A5P29400 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.96■□□□□ 0.79
COL4A5P29400 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.96■□□□□ 0.79
COL4A5P29400 MYCLP2-201ENST00000449268 967 ntBASIC19.96■□□□□ 0.79
COL4A5P29400 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.96■□□□□ 0.79
COL4A5P29400 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.96■□□□□ 0.79
COL4A5P29400 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.96■□□□□ 0.79
COL4A5P29400 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.96■□□□□ 0.79
COL4A5P29400 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A5P29400 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
COL4A5P29400 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
COL4A5P29400 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A5P29400 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A5P29400 NOC2LP1-202ENST00000452600 2235 ntBASIC19.96■□□□□ 0.79
COL4A5P29400 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL4A5P29400 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A5P29400 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A5P29400 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A5P29400 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A5P29400 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A5P29400 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL4A5P29400 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL4A5P29400 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms