Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3BP20337 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB3BP20337 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.88□□□□□ -0.03
RAB3BP20337 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB3BP20337 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3BP20337 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
RAB3BP20337 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB3BP20337 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 FAM8A6P-201ENST00000407496 1135 ntBASIC14.88□□□□□ -0.03
RAB3BP20337 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB3BP20337 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.88□□□□□ -0.03
RAB3BP20337 AC023824.1-201ENST00000562945 2975 ntBASIC14.88□□□□□ -0.03
RAB3BP20337 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.88□□□□□ -0.03
RAB3BP20337 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.88□□□□□ -0.03
RAB3BP20337 GPR32P1-201ENST00000601788 811 ntBASIC14.88□□□□□ -0.03
RAB3BP20337 AC141257.4-201ENST00000634557 245 ntBASIC14.88□□□□□ -0.03
RAB3BP20337 AC136944.6-201ENST00000634818 245 ntBASIC14.88□□□□□ -0.03
RAB3BP20337 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3BP20337 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB3BP20337 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3BP20337 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3BP20337 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RAB3BP20337 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3BP20337 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3BP20337 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3BP20337 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RAB3BP20337 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB3BP20337 AC104640.1-201ENST00000562617 2109 ntBASIC14.87□□□□□ -0.03
RAB3BP20337 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.87□□□□□ -0.03
RAB3BP20337 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB3BP20337 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.87□□□□□ -0.03
RAB3BP20337 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAB3BP20337 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB3BP20337 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAB3BP20337 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB3BP20337 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 AL049757.1-201ENST00000616842 1596 ntBASIC14.87□□□□□ -0.03
RAB3BP20337 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB3BP20337 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB3BP20337 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB3BP20337 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB3BP20337 AC103564.2-201ENST00000432853 1299 ntBASIC14.87□□□□□ -0.03
RAB3BP20337 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB3BP20337 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 AC122714.2-201ENST00000502787 707 ntBASIC14.87□□□□□ -0.03
RAB3BP20337 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB3BP20337 AL355075.4-201ENST00000554988 638 ntBASIC14.87□□□□□ -0.03
RAB3BP20337 ZNF444P1-201ENST00000559497 298 ntBASIC14.87□□□□□ -0.03
RAB3BP20337 STK25P1-201ENST00000585406 838 ntBASIC14.87□□□□□ -0.03
RAB3BP20337 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.87□□□□□ -0.03
RAB3BP20337 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RAB3BP20337 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB3BP20337 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB3BP20337 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB3BP20337 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB3BP20337 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB3BP20337 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms