Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF1BP20333 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF1BP20333 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TNFRSF1BP20333 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
TNFRSF1BP20333 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 TUBB8P12-201ENST00000308911 1335 ntBASIC15.76■□□□□ 0.11
TNFRSF1BP20333 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 TUBB7P-202ENST00000428444 1305 ntBASIC15.76■□□□□ 0.11
TNFRSF1BP20333 TUBB8P7-204ENST00000567960 1332 ntBASIC15.76■□□□□ 0.11
TNFRSF1BP20333 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 AP002414.4-201ENST00000589764 1148 ntBASIC15.76■□□□□ 0.11
TNFRSF1BP20333 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.76■□□□□ 0.11
TNFRSF1BP20333 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TNFRSF1BP20333 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 AL513523.2-202ENST00000427283 2040 ntBASIC15.75■□□□□ 0.11
TNFRSF1BP20333 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 AC097637.2-201ENST00000624096 1997 ntBASIC15.75■□□□□ 0.11
TNFRSF1BP20333 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 LINC00265-3P-201ENST00000447588 903 ntBASIC15.75■□□□□ 0.11
TNFRSF1BP20333 KRT17P6-201ENST00000453795 1220 ntBASIC15.75■□□□□ 0.11
TNFRSF1BP20333 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 KRT18P21-201ENST00000515767 1272 ntBASIC15.75■□□□□ 0.11
TNFRSF1BP20333 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 LINC00554-201ENST00000564841 3011 ntBASIC15.75■□□□□ 0.11
TNFRSF1BP20333 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TNFRSF1BP20333 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms