Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.71■□□□□ 0.11
UBL4AP11441 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.71■□□□□ 0.11
UBL4AP11441 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.71■□□□□ 0.11
UBL4AP11441 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.71■□□□□ 0.11
UBL4AP11441 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.71■□□□□ 0.11
UBL4AP11441 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.71■□□□□ 0.11
UBL4AP11441 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.71■□□□□ 0.11
UBL4AP11441 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.71■□□□□ 0.11
UBL4AP11441 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 AL139424.1-201ENST00000607572 797 ntBASIC15.71■□□□□ 0.11
UBL4AP11441 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.71■□□□□ 0.11
UBL4AP11441 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.71■□□□□ 0.11
UBL4AP11441 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
UBL4AP11441 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
UBL4AP11441 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
UBL4AP11441 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBL4AP11441 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
UBL4AP11441 NKILA-202ENST00000614771 2598 ntBASIC15.71■□□□□ 0.1
UBL4AP11441 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBL4AP11441 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBL4AP11441 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.71■□□□□ 0.1
UBL4AP11441 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBL4AP11441 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBL4AP11441 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
UBL4AP11441 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBL4AP11441 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
UBL4AP11441 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.7■□□□□ 0.1
UBL4AP11441 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBL4AP11441 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.7■□□□□ 0.1
UBL4AP11441 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBL4AP11441 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.7■□□□□ 0.1
UBL4AP11441 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBL4AP11441 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.7■□□□□ 0.1
UBL4AP11441 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.7■□□□□ 0.1
UBL4AP11441 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.7■□□□□ 0.1
UBL4AP11441 AC073648.2-201ENST00000510116 352 ntBASIC15.7■□□□□ 0.1
UBL4AP11441 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
UBL4AP11441 AC021087.4-201ENST00000563761 564 ntBASIC15.7■□□□□ 0.1
UBL4AP11441 AC025062.2-201ENST00000605477 670 ntBASIC15.7■□□□□ 0.1
UBL4AP11441 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
UBL4AP11441 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
UBL4AP11441 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBL4AP11441 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
UBL4AP11441 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBL4AP11441 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBL4AP11441 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBL4AP11441 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBL4AP11441 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBL4AP11441 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
UBL4AP11441 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBL4AP11441 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.7■□□□□ 0.1
UBL4AP11441 AC011676.5-201ENST00000624864 2660 ntBASIC15.7■□□□□ 0.1
UBL4AP11441 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.7■□□□□ 0.1
UBL4AP11441 AL590787.1-201ENST00000568856 1315 ntBASIC15.69■□□□□ 0.1
UBL4AP11441 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.69■□□□□ 0.1
UBL4AP11441 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
UBL4AP11441 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
UBL4AP11441 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UBL4AP11441 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 AC092068.3-201ENST00000587894 2016 ntBASIC15.69■□□□□ 0.1
UBL4AP11441 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.69■□□□□ 0.1
UBL4AP11441 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.69■□□□□ 0.1
UBL4AP11441 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 AL450487.1-201ENST00000426799 995 ntBASIC15.69■□□□□ 0.1
UBL4AP11441 EMBP1-201ENST00000458200 901 ntBASIC15.69■□□□□ 0.1
UBL4AP11441 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.69■□□□□ 0.1
UBL4AP11441 AL691432.3-201ENST00000621860 400 ntBASIC15.69■□□□□ 0.1
UBL4AP11441 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
UBL4AP11441 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
UBL4AP11441 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
UBL4AP11441 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
UBL4AP11441 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UBL4AP11441 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UBL4AP11441 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBL4AP11441 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms