Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RARBP10826 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RARBP10826 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RARBP10826 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RARBP10826 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
RARBP10826 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
RARBP10826 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.87■□□□□ 0.61
RARBP10826 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.87■□□□□ 0.61
RARBP10826 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.87■□□□□ 0.61
RARBP10826 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.87■□□□□ 0.61
RARBP10826 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.87■□□□□ 0.61
RARBP10826 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.87■□□□□ 0.61
RARBP10826 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RARBP10826 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
RARBP10826 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RARBP10826 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.87■□□□□ 0.61
RARBP10826 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.87■□□□□ 0.61
RARBP10826 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RARBP10826 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.87■□□□□ 0.61
RARBP10826 AC090340.1-201ENST00000620778 4980 ntBASIC18.87■□□□□ 0.61
RARBP10826 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RARBP10826 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.87■□□□□ 0.61
RARBP10826 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RARBP10826 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.87■□□□□ 0.61
RARBP10826 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
RARBP10826 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.86■□□□□ 0.61
RARBP10826 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARBP10826 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RARBP10826 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.86■□□□□ 0.61
RARBP10826 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RARBP10826 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.86■□□□□ 0.61
RARBP10826 AC100757.3-201ENST00000622361 1406 ntBASIC18.86■□□□□ 0.61
RARBP10826 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.86■□□□□ 0.61
RARBP10826 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RARBP10826 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARBP10826 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARBP10826 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.86■□□□□ 0.61
RARBP10826 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARBP10826 CR383656.12-201ENST00000549567 513 ntBASIC18.86■□□□□ 0.61
RARBP10826 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.86■□□□□ 0.61
RARBP10826 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RARBP10826 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RARBP10826 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARBP10826 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.86■□□□□ 0.61
RARBP10826 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARBP10826 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARBP10826 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RARBP10826 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RARBP10826 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RARBP10826 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RARBP10826 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.85■□□□□ 0.61
RARBP10826 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.85■□□□□ 0.61
RARBP10826 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RARBP10826 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RARBP10826 MRPS18AP1-201ENST00000414458 589 ntBASIC18.85■□□□□ 0.61
RARBP10826 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.85■□□□□ 0.61
RARBP10826 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.85■□□□□ 0.61
RARBP10826 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.85■□□□□ 0.61
RARBP10826 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.85■□□□□ 0.61
RARBP10826 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.85■□□□□ 0.61
RARBP10826 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.85■□□□□ 0.61
RARBP10826 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.85■□□□□ 0.61
RARBP10826 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RARBP10826 AC018529.1-201ENST00000613063 361 ntBASIC18.85■□□□□ 0.61
RARBP10826 AL662799.1-202ENST00000614205 422 ntBASIC18.85■□□□□ 0.61
RARBP10826 AL590560.3-201ENST00000623350 461 ntBASIC18.85■□□□□ 0.61
RARBP10826 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.85■□□□□ 0.61
RARBP10826 AC025048.6-201ENST00000634326 1161 ntBASIC18.85■□□□□ 0.61
RARBP10826 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.85■□□□□ 0.61
RARBP10826 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RARBP10826 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.85■□□□□ 0.61
RARBP10826 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RARBP10826 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RARBP10826 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RARBP10826 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RARBP10826 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RARBP10826 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RARBP10826 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.85■□□□□ 0.61
RARBP10826 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.84■□□□□ 0.61
RARBP10826 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARBP10826 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
RARBP10826 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RARBP10826 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.84■□□□□ 0.61
RARBP10826 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.84■□□□□ 0.61
RARBP10826 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RARBP10826 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.84■□□□□ 0.61
RARBP10826 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RARBP10826 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.84■□□□□ 0.61
RARBP10826 AL138918.1-201ENST00000568306 659 ntBASIC18.84■□□□□ 0.61
RARBP10826 SPDYE22P-201ENST00000582158 798 ntBASIC18.84■□□□□ 0.61
RARBP10826 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.84■□□□□ 0.61
RARBP10826 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.84■□□□□ 0.61
RARBP10826 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.84■□□□□ 0.61
RARBP10826 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARBP10826 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RARBP10826 FZD10-202ENST00000539839 3282 ntBASIC18.84■□□□□ 0.61
RARBP10826 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.84■□□□□ 0.61
RARBP10826 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.84■□□□□ 0.61
RARBP10826 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.84■□□□□ 0.61
RARBP10826 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms