Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RARAP10276 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.78■□□□□ 0.44
RARAP10276 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.78■□□□□ 0.44
RARAP10276 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
RARAP10276 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.78■□□□□ 0.44
RARAP10276 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RARAP10276 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RARAP10276 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.78■□□□□ 0.44
RARAP10276 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
RARAP10276 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.78■□□□□ 0.44
RARAP10276 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.78■□□□□ 0.44
RARAP10276 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.78■□□□□ 0.44
RARAP10276 AL139424.1-201ENST00000607572 797 ntBASIC17.78■□□□□ 0.44
RARAP10276 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RARAP10276 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RARAP10276 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.78■□□□□ 0.44
RARAP10276 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RARAP10276 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.78■□□□□ 0.44
RARAP10276 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.78■□□□□ 0.44
RARAP10276 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RARAP10276 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.78■□□□□ 0.44
RARAP10276 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RARAP10276 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RARAP10276 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RARAP10276 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RARAP10276 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RARAP10276 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.77■□□□□ 0.44
RARAP10276 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RARAP10276 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RARAP10276 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.77■□□□□ 0.44
RARAP10276 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RARAP10276 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.77■□□□□ 0.44
RARAP10276 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.77■□□□□ 0.44
RARAP10276 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.77■□□□□ 0.44
RARAP10276 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RARAP10276 AC021087.4-201ENST00000563761 564 ntBASIC17.77■□□□□ 0.44
RARAP10276 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.77■□□□□ 0.44
RARAP10276 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.77■□□□□ 0.44
RARAP10276 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.77■□□□□ 0.44
RARAP10276 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RARAP10276 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RARAP10276 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.77■□□□□ 0.44
RARAP10276 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
RARAP10276 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RARAP10276 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RARAP10276 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.77■□□□□ 0.44
RARAP10276 AL391256.1-201ENST00000443260 1855 ntBASIC17.77■□□□□ 0.43
RARAP10276 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RARAP10276 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RARAP10276 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RARAP10276 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RARAP10276 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RARAP10276 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RARAP10276 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RARAP10276 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.76■□□□□ 0.43
RARAP10276 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RARAP10276 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.76■□□□□ 0.43
RARAP10276 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RARAP10276 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
RARAP10276 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.76■□□□□ 0.43
RARAP10276 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RARAP10276 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
RARAP10276 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.76■□□□□ 0.43
RARAP10276 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.76■□□□□ 0.43
RARAP10276 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.76■□□□□ 0.43
RARAP10276 SCARNA2-201ENST00000458748 420 ntBASIC17.76■□□□□ 0.43
RARAP10276 AC025062.2-201ENST00000605477 670 ntBASIC17.76■□□□□ 0.43
RARAP10276 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms