Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 AC073389.1-201ENST00000595595 795 ntBASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 AL021920.2-201ENST00000624828 1351 ntBASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CSB-PGBD3P0DP91 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 LINC00895-201ENST00000629028 1637 ntBASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 KRT8P49-201ENST00000604166 1432 ntBASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 MTND6P24-201ENST00000440466 518 ntBASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC22.24■■□□□ 1.15
CSB-PGBD3P0DP91 CU639417.3-201ENST00000624240 1404 ntBASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 HLA-H-201ENST00000383620 1096 ntBASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 AL353705.2-201ENST00000428243 662 ntBASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 PTPA-220ENST00000436883 532 ntTSL 4 BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 PRYP6-201ENST00000514804 343 ntBASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC22.23■■□□□ 1.15
CSB-PGBD3P0DP91 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CSB-PGBD3P0DP91 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms