Protein–RNA interactions for Protein: P08648

ITGA5, Integrin alpha-5, humanhuman

Predictions only

Length 1,049 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5P08648 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
ITGA5P08648 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA5P08648 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ITGA5P08648 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA5P08648 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ITGA5P08648 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
ITGA5P08648 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
ITGA5P08648 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.3■□□□□ 0.04
ITGA5P08648 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.3■□□□□ 0.04
ITGA5P08648 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.3■□□□□ 0.04
ITGA5P08648 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.3■□□□□ 0.04
ITGA5P08648 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ITGA5P08648 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.3■□□□□ 0.04
ITGA5P08648 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.3■□□□□ 0.04
ITGA5P08648 AC105020.1-201ENST00000435356 2205 ntBASIC15.3■□□□□ 0.04
ITGA5P08648 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.3■□□□□ 0.04
ITGA5P08648 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.3■□□□□ 0.04
ITGA5P08648 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.3■□□□□ 0.04
ITGA5P08648 PCDHA14-201ENST00000506751 2298 ntBASIC15.3■□□□□ 0.04
ITGA5P08648 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.3■□□□□ 0.04
ITGA5P08648 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.3■□□□□ 0.04
ITGA5P08648 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.3■□□□□ 0.04
ITGA5P08648 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.3■□□□□ 0.04
ITGA5P08648 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.3■□□□□ 0.04
ITGA5P08648 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.3■□□□□ 0.04
ITGA5P08648 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.3■□□□□ 0.04
ITGA5P08648 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.3■□□□□ 0.04
ITGA5P08648 PCDHB19P-201ENST00000570871 2371 ntBASIC15.3■□□□□ 0.04
ITGA5P08648 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.3■□□□□ 0.04
ITGA5P08648 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ITGA5P08648 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
ITGA5P08648 AL049840.3-201ENST00000602669 611 ntBASIC15.3■□□□□ 0.04
ITGA5P08648 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.3■□□□□ 0.04
ITGA5P08648 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.3■□□□□ 0.04
ITGA5P08648 AC107918.4-202ENST00000641623 219 ntBASIC15.3■□□□□ 0.04
ITGA5P08648 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ITGA5P08648 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ITGA5P08648 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
ITGA5P08648 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ITGA5P08648 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ITGA5P08648 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITGA5P08648 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.29■□□□□ 0.04
ITGA5P08648 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ITGA5P08648 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ITGA5P08648 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ITGA5P08648 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
ITGA5P08648 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
ITGA5P08648 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.29■□□□□ 0.04
ITGA5P08648 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.29■□□□□ 0.04
ITGA5P08648 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITGA5P08648 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ITGA5P08648 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ITGA5P08648 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.29■□□□□ 0.04
ITGA5P08648 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ITGA5P08648 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.29■□□□□ 0.04
ITGA5P08648 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ITGA5P08648 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ITGA5P08648 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ITGA5P08648 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.29■□□□□ 0.04
ITGA5P08648 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITGA5P08648 LAGE3P1-201ENST00000425356 484 ntBASIC15.29■□□□□ 0.04
ITGA5P08648 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITGA5P08648 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.29■□□□□ 0.04
ITGA5P08648 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.29■□□□□ 0.04
ITGA5P08648 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ITGA5P08648 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.29■□□□□ 0.04
ITGA5P08648 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.29■□□□□ 0.04
ITGA5P08648 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.29■□□□□ 0.04
ITGA5P08648 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.29■□□□□ 0.04
ITGA5P08648 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.29■□□□□ 0.04
ITGA5P08648 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITGA5P08648 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
ITGA5P08648 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ITGA5P08648 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITGA5P08648 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITGA5P08648 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.29■□□□□ 0.04
ITGA5P08648 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ITGA5P08648 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms