Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.04■□□□□ 0.64
TPM3P06753 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TPM3P06753 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
TPM3P06753 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.04■□□□□ 0.64
TPM3P06753 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.04■□□□□ 0.64
TPM3P06753 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.04■□□□□ 0.64
TPM3P06753 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.04■□□□□ 0.64
TPM3P06753 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.04■□□□□ 0.64
TPM3P06753 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.04■□□□□ 0.64
TPM3P06753 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.04■□□□□ 0.64
TPM3P06753 AC019129.2-201ENST00000609837 1235 ntBASIC19.04■□□□□ 0.64
TPM3P06753 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.04■□□□□ 0.64
TPM3P06753 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TPM3P06753 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
TPM3P06753 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
TPM3P06753 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.03■□□□□ 0.64
TPM3P06753 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.03■□□□□ 0.64
TPM3P06753 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.03■□□□□ 0.64
TPM3P06753 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
TPM3P06753 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.03■□□□□ 0.64
TPM3P06753 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM3P06753 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM3P06753 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.03■□□□□ 0.64
TPM3P06753 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TPM3P06753 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM3P06753 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM3P06753 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM3P06753 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TPM3P06753 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TPM3P06753 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.03■□□□□ 0.64
TPM3P06753 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.03■□□□□ 0.64
TPM3P06753 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.03■□□□□ 0.64
TPM3P06753 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TPM3P06753 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
TPM3P06753 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.03■□□□□ 0.64
TPM3P06753 AC007326.2-201ENST00000624224 7579 ntBASIC19.03■□□□□ 0.64
TPM3P06753 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.03■□□□□ 0.64
TPM3P06753 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM3P06753 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM3P06753 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.03■□□□□ 0.64
TPM3P06753 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.03■□□□□ 0.64
TPM3P06753 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
TPM3P06753 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM3P06753 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM3P06753 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.03■□□□□ 0.64
TPM3P06753 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TPM3P06753 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TPM3P06753 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TPM3P06753 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM3P06753 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TPM3P06753 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM3P06753 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
TPM3P06753 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 MIR662-201ENST00000384847 95 ntBASIC19.02■□□□□ 0.64
TPM3P06753 LIN28AP1-201ENST00000429574 405 ntBASIC19.02■□□□□ 0.64
TPM3P06753 TSPY15P-201ENST00000457163 923 ntBASIC19.02■□□□□ 0.64
TPM3P06753 COX11P1-201ENST00000489116 835 ntBASIC19.02■□□□□ 0.64
TPM3P06753 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.02■□□□□ 0.64
TPM3P06753 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM3P06753 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM3P06753 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.02■□□□□ 0.64
TPM3P06753 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TPM3P06753 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.02■□□□□ 0.63
TPM3P06753 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.02■□□□□ 0.63
TPM3P06753 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms