Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
APOC3P02656 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13.6□□□□□ -0.23
APOC3P02656 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC3P02656 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC3P02656 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
APOC3P02656 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC3P02656 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC3P02656 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC3P02656 AC124947.2-201ENST00000547118 1133 ntBASIC13.6□□□□□ -0.23
APOC3P02656 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC3P02656 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC3P02656 MIR4466-201ENST00000606121 54 ntBASIC13.6□□□□□ -0.23
APOC3P02656 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
APOC3P02656 AL121906.2-201ENST00000621597 723 ntBASIC13.6□□□□□ -0.23
APOC3P02656 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
APOC3P02656 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
APOC3P02656 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
APOC3P02656 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
APOC3P02656 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC3P02656 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC3P02656 AC005912.2-201ENST00000619492 2400 ntBASIC13.6□□□□□ -0.23
APOC3P02656 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC3P02656 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC3P02656 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC3P02656 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.6□□□□□ -0.23
APOC3P02656 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC3P02656 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 AC132938.6-201ENST00000623828 1655 ntBASIC13.59□□□□□ -0.23
APOC3P02656 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
APOC3P02656 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC3P02656 LINC01101-201ENST00000622953 1884 ntBASIC13.59□□□□□ -0.23
APOC3P02656 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC3P02656 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
APOC3P02656 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC3P02656 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC3P02656 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.59□□□□□ -0.23
APOC3P02656 RPS2P52-201ENST00000469610 820 ntBASIC13.59□□□□□ -0.23
APOC3P02656 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.59□□□□□ -0.23
APOC3P02656 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.59□□□□□ -0.23
APOC3P02656 UBE2DNL-204ENST00000602536 740 ntBASIC13.59□□□□□ -0.23
APOC3P02656 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
APOC3P02656 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
APOC3P02656 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
APOC3P02656 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
APOC3P02656 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.59□□□□□ -0.23
APOC3P02656 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
APOC3P02656 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
APOC3P02656 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
APOC3P02656 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC3P02656 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
APOC3P02656 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOC3P02656 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC13.58□□□□□ -0.23
APOC3P02656 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.23
APOC3P02656 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOC3P02656 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOC3P02656 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOC3P02656 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOC3P02656 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC3P02656 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC3P02656 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC3P02656 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC3P02656 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC3P02656 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC3P02656 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC3P02656 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms