Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.42■□□□□ 0.86
COL4A1P02462 AL512361.1-201ENST00000554200 418 ntBASIC20.42■□□□□ 0.86
COL4A1P02462 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A1P02462 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.42■□□□□ 0.86
COL4A1P02462 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A1P02462 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A1P02462 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.42■□□□□ 0.86
COL4A1P02462 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
COL4A1P02462 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A1P02462 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A1P02462 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A1P02462 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A1P02462 AL645728.1-201ENST00000366221 2101 ntBASIC20.42■□□□□ 0.86
COL4A1P02462 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
COL4A1P02462 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A1P02462 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
COL4A1P02462 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.42■□□□□ 0.86
COL4A1P02462 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
COL4A1P02462 RN7SL692P-201ENST00000464677 288 ntBASIC20.42■□□□□ 0.86
COL4A1P02462 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COL4A1P02462 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
COL4A1P02462 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.42■□□□□ 0.86
COL4A1P02462 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.42■□□□□ 0.86
COL4A1P02462 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A1P02462 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A1P02462 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
COL4A1P02462 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.41■□□□□ 0.86
COL4A1P02462 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
COL4A1P02462 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A1P02462 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
COL4A1P02462 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A1P02462 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COL4A1P02462 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A1P02462 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
COL4A1P02462 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.41■□□□□ 0.86
COL4A1P02462 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A1P02462 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
COL4A1P02462 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.41■□□□□ 0.86
COL4A1P02462 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.41■□□□□ 0.86
COL4A1P02462 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A1P02462 AC007274.1-201ENST00000439805 662 ntBASIC20.41■□□□□ 0.86
COL4A1P02462 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
COL4A1P02462 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A1P02462 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.41■□□□□ 0.86
COL4A1P02462 TUBB8P12-201ENST00000308911 1335 ntBASIC20.41■□□□□ 0.86
COL4A1P02462 TUBB7P-202ENST00000428444 1305 ntBASIC20.41■□□□□ 0.86
COL4A1P02462 TUBB8P7-204ENST00000567960 1332 ntBASIC20.41■□□□□ 0.86
COL4A1P02462 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A1P02462 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.41■□□□□ 0.86
COL4A1P02462 GGT4P-201ENST00000623672 1708 ntBASIC20.41■□□□□ 0.86
COL4A1P02462 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
COL4A1P02462 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A1P02462 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
COL4A1P02462 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.4■□□□□ 0.86
COL4A1P02462 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC20.4■□□□□ 0.86
COL4A1P02462 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A1P02462 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A1P02462 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A1P02462 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COL4A1P02462 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A1P02462 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.4■□□□□ 0.86
COL4A1P02462 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.4■□□□□ 0.86
COL4A1P02462 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.4■□□□□ 0.86
COL4A1P02462 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
COL4A1P02462 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.4■□□□□ 0.86
COL4A1P02462 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A1P02462 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A1P02462 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL4A1P02462 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.4■□□□□ 0.86
COL4A1P02462 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COL4A1P02462 AL645608.8-201ENST00000606034 2086 ntBASIC20.39■□□□□ 0.86
COL4A1P02462 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.39■□□□□ 0.86
COL4A1P02462 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL4A1P02462 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.39■□□□□ 0.86
COL4A1P02462 HLA-V-204ENST00000476601 1289 ntBASIC20.39■□□□□ 0.86
COL4A1P02462 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL4A1P02462 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.39■□□□□ 0.86
COL4A1P02462 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.39■□□□□ 0.86
COL4A1P02462 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.39■□□□□ 0.86
COL4A1P02462 AC010336.2-201ENST00000564226 506 ntBASIC20.39■□□□□ 0.86
COL4A1P02462 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
COL4A1P02462 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.39■□□□□ 0.86
COL4A1P02462 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.39■□□□□ 0.85
COL4A1P02462 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A1P02462 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A1P02462 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.39■□□□□ 0.85
COL4A1P02462 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A1P02462 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A1P02462 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL4A1P02462 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL4A1P02462 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL4A1P02462 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.38■□□□□ 0.85
COL4A1P02462 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.38■□□□□ 0.85
COL4A1P02462 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.38■□□□□ 0.85
COL4A1P02462 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
COL4A1P02462 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL4A1P02462 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.38■□□□□ 0.85
COL4A1P02462 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL4A1P02462 AL132655.2-201ENST00000596276 594 ntBASIC20.38■□□□□ 0.85
COL4A1P02462 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms