Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DRAP01903 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DRAP01903 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.18■□□□□ 0.5
HLA-DRAP01903 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DRAP01903 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.18■□□□□ 0.5
HLA-DRAP01903 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.18■□□□□ 0.5
HLA-DRAP01903 CXCL1P1-201ENST00000502804 216 ntBASIC18.18■□□□□ 0.5
HLA-DRAP01903 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.18■□□□□ 0.5
HLA-DRAP01903 AC013467.2-201ENST00000605472 835 ntBASIC18.18■□□□□ 0.5
HLA-DRAP01903 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DRAP01903 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DRAP01903 AL353732.1-201ENST00000569618 1459 ntBASIC18.18■□□□□ 0.5
HLA-DRAP01903 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DRAP01903 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
HLA-DRAP01903 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DRAP01903 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DRAP01903 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HLA-DRAP01903 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 AC007967.2-201ENST00000432613 625 ntBASIC18.17■□□□□ 0.5
HLA-DRAP01903 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 AC106730.1-201ENST00000566722 1090 ntBASIC18.17■□□□□ 0.5
HLA-DRAP01903 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 AC005412.3-201ENST00000580309 715 ntBASIC18.17■□□□□ 0.5
HLA-DRAP01903 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 AC131009.4-201ENST00000624048 1740 ntBASIC18.17■□□□□ 0.5
HLA-DRAP01903 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.17■□□□□ 0.5
HLA-DRAP01903 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HLA-DRAP01903 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 AC064836.3-201ENST00000607928 673 ntBASIC18.16■□□□□ 0.5
HLA-DRAP01903 AC010507.1-201ENST00000633895 436 ntBASIC18.16■□□□□ 0.5
HLA-DRAP01903 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HLA-DRAP01903 ZNF259P1-201ENST00000407656 1365 ntBASIC18.16■□□□□ 0.5
HLA-DRAP01903 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.16■□□□□ 0.5
HLA-DRAP01903 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
HLA-DRAP01903 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms